Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19f23f
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    26   0.92 
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    25   2.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.7  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   8.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.5  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 198 LSIGSNSLMIAGSTSIGSCRMGTGPPKPG 112
           L +G+ S    G   +GS   GTGP  PG
Sbjct: 13  LLLGNGSSSSGGGVGLGSGIGGTGPSSPG 41


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +1

Query: 178 RIRA--NRQRTRYRRLPRSSFPS--RHWSHRPRPGFS 276
           R+RA   RQ TR+ R PR   P+  R   ++ + GFS
Sbjct: 24  RVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60



 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 481 YACVTRHHRCPRPSQP 528
           Y  +TR HR PRP +P
Sbjct: 30  YRQMTRFHRAPRPWRP 45


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 350 IVDEESEIKPDPVIVV-DGPEVTPVIIADPAIVLPEPVIVAP 472
           + D    + P P + V   PE +PV++  P       + VAP
Sbjct: 354 VSDRSESVSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAP 395


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 277 GRSLAGGDGTNDDWGR 230
           GRS AG +GT   WG+
Sbjct: 110 GRSFAGQNGTVIGWGK 125


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 88   ACQPRPGDAWLGRPCSHPTRAYRRRTCNHQRIRANRQRTRYRRL 219
            A QP P  +          R  RRR   ++  +  RQ+ R +RL
Sbjct: 1029 AAQPDPASSLPEDMAEAERRLLRRREVRNRSAQRRRQQQRQQRL 1072


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,660
Number of Sequences: 2352
Number of extensions: 11644
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)