Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19f21r
(827 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 0.001
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 35 0.012
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.15
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 31 0.26
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 30 0.46
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 30 0.46
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 29 0.61
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 28 1.4
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 28 1.4
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 27 2.5
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 27 4.3
SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 4.3
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 27 4.3
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 26 5.7
SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces pom... 26 5.7
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 26 5.7
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 26 7.5
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 26 7.5
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 26 7.5
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 9.9
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = -1
Query: 794 GGTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G +++N SS+ A Y TK A+ F+ GL YA+ G+RV ++ G TP
Sbjct: 171 GSSIVNCSSINAYVGRPDLLDYTSTKGAITAFTR--GLSNQYAQHGIRVNAVAPGPIYTP 228
Query: 614 LLNGT 600
L++ T
Sbjct: 229 LVSST 233
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 35.1 bits (77), Expect = 0.012
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTPL 612
GT++N++S+ + Y +K+A+L +SN + +E A GV+V SI G T
Sbjct: 128 GTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIE--LAPFGVQVTSIMTGGVQTK- 184
Query: 611 LNGTKLGSFDE 579
+ LG+ E
Sbjct: 185 IQSKPLGTMTE 195
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 31.5 bits (68), Expect = 0.15
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1
Query: 806 ECGKGGTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCI 687
E GKGG +L ISSVA S +Y +K AV S I
Sbjct: 123 ESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTI 162
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -1
Query: 785 VLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTPLLN 606
+LNISS + +Y +K+ + F+ + E A G+RV +I G DTP+L+
Sbjct: 133 ILNISSRLSTYALPGTSVYAASKAGLESFTKVLAAE--VASKGIRVNAISPGYVDTPMLS 190
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 29.9 bits (64), Expect = 0.46
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATD 621
G ++N+SS+ L +Y+GTK A+ S + E V+++ F AT+
Sbjct: 94 GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATE 150
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 29.9 bits (64), Expect = 0.46
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATD 621
G ++N+SS+ L +Y+GTK A+ S + E V+++ F AT+
Sbjct: 94 GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATE 150
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 29.5 bits (63), Expect = 0.61
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -1
Query: 623 DTPLLNGTKLGSFDEEIDGTCVEAIQKNYPIQKMESAAKGLVEAYEHAKSGDTWIITTN- 447
D N + + + T VE N + KM+S + +E A+S D W I N
Sbjct: 294 DVQEFNRVLQDNLERSMRDTKVENALTNLFVGKMKSYIACVNVNFESARSEDYWDIQLNV 353
Query: 446 KPAKNITDTVKKSYELLSYHVFN*MFFFSYLR*KFGFRPAIQGRKFNLF 300
K KN+ D+ + ++ + N F +Y GF+ A +G F F
Sbjct: 354 KGMKNLEDSFRSYIQVETLEGDNCYFADTY-----GFQEAKKGVIFESF 397
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 614 LLNGTKLGSFDEEIDGTCVEAIQKNYPIQKMESAAKGLVEAYEHAKSGD 468
L N K S + I+G+ +E+ + N P++ S L E YE + D
Sbjct: 646 LENTIKENSINSHIEGSEMESEETNMPVKSFFSTVNQLEETYEKKELKD 694
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDT 618
G +LN+ S+A +Y TKSA+ QF++ L + + +R++ + G +T
Sbjct: 138 GDILNVGSIAGRESYVGGSVYCSTKSALAQFTS--ALRKETIDTRIRIMEVDPGLVET 193
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 415 KSLMNFYRITFSIECFFSPTYAESSVFVPLYR 320
K ++ Y I F++ F P E++ + PLY+
Sbjct: 129 KPFVDIYPINFTLHVLFDPINGENTSYSPLYQ 160
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 782 LNISSVAALCQSHLFPIYFGTKSAVL 705
LN S+ + QSHL+PI FGT +L
Sbjct: 515 LNTQSLNRI-QSHLYPIAFGTDENIL 539
>SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 116
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 569 GTCVEAIQKNYPIQKMESAAKGLVEAYEHAKSG 471
G C+EAIQ N ++ +K +E E +G
Sbjct: 39 GKCIEAIQLNNSLEDFRKYSKEFLETVEFISTG 71
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 476 SGDTWIITTNKPAKNITDTVKKSYELLSYHVF 381
S + TT P++ I V+KSY L + HVF
Sbjct: 225 SSPEMVATTQLPSQCIPHLVQKSYYLQNRHVF 256
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 590 SFDEEIDGTCVEAIQKNYPIQKMESAAKGLVEAYEHAKSG 471
S DE++DG ++ PI K ES + YE + G
Sbjct: 255 SMDEDVDGYSDHSVSVAAPIPKKESRKESSNSLYESYRLG 294
>SPCC576.02 |||hydantoin racemase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 236
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 426 SDVLCRFVCCDDPSVATFSMLIGLDQTFGCRFHLLNRIILLDGLNTSAV 572
SDV RF+ C P A + T F L + LDG++ AV
Sbjct: 29 SDVKLRFLTCPQPGAAVIDSITEATLTAALVFQALTPSV-LDGVDAIAV 76
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 441 RFVCCDDPSVATFSMLIGL 497
R+ CC+DP+V+ ML GL
Sbjct: 313 RWCCCEDPTVSFILMLGGL 331
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 88 IVKNLAPVEYRAGVQGRCPVGGQGGRAFCLF 180
+VK L +EYR C V G G F +F
Sbjct: 23 LVKGLKRLEYRGYDSSGCAVDGDEGEDFIMF 53
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 574 ISSSKLPSLVPFNSGVSVAPKQILSTRTPLLA*CSSNPIQ 693
ISSS++ P N + P + + + P+LA + P++
Sbjct: 328 ISSSRILLYTPENEHFGIVPLEAMLRKVPVLAQTNGGPLE 367
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 110 WSTEPGSRGDALSGGK 157
WST+ G+RG LSGG+
Sbjct: 609 WSTQVGTRGLQLSGGQ 624
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.4 bits (53), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 779 NISSVAALC-QSHLFPIYFGTKSAVLQF 699
N+ LC SH+FP+Y T AV+ F
Sbjct: 512 NVVKSYDLCIDSHIFPLYSDTWCAVMDF 539
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,613,406
Number of Sequences: 5004
Number of extensions: 79167
Number of successful extensions: 285
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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