Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19f21r
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical... 47 1e-05
AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical... 44 2e-04
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 38 0.007
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical pr... 36 0.047
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 34 0.11
AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenase... 32 0.44
U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical pr... 30 2.3
U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 28 7.1
U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AC024791-27|AAM43788.1| 254|Caenorhabditis elegans Hypothetical
protein Y47G6A.22 protein.
Length = 254
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTPL 612
GTV+N+SS+ C Y +KSAV QF+ C+ LE A +GVRV ++C G T T L
Sbjct: 132 GTVVNVSSINGPCPFPNVTYYCMSKSAVDQFTKCLALE--MAPNGVRVNAVCPGVTVTNL 189
>AC024791-25|AAK29888.4| 255|Caenorhabditis elegans Hypothetical
protein Y47G6A.21 protein.
Length = 255
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDT 618
GTV+N+SS+ C Y +KSAV QF+ C+ LE A +GVRV ++C G T
Sbjct: 133 GTVVNVSSINGPCPFAGVTYYCMSKSAVDQFTKCLALE--MAPNGVRVNAVCPGVIVT 188
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -1
Query: 791 GTVLNISSVAALCQS-HLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDT 618
G ++N+SS+AA Q+ + P Y K+A+ Q++ C+ L+ K GVRV S+ G T
Sbjct: 139 GEIVNVSSIAAGPQAVSMSPYYAAAKAALNQYTRCVALD--LIKQGVRVNSVSPGIIAT 195
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHL-FPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G ++N+SS+ A Q+H +P Y K+A+ Q++ C ++ + GVRV S+ GA T
Sbjct: 139 GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAID--LIQHGVRVNSVSPGAVATG 196
Query: 614 LLNGTKL 594
+ L
Sbjct: 197 FMGAMGL 203
>Z68341-1|CAA92764.1| 258|Caenorhabditis elegans Hypothetical
protein F01G4.2 protein.
Length = 258
Score = 35.5 bits (78), Expect = 0.047
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = -1
Query: 821 DYGKAECGKGGTVLNISSVAALCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLS 642
++ K G+ G V+N +SVAA Y +K A++ + + L +A G+R +
Sbjct: 135 EHEKDANGQRGVVINTASVAAFDGQTGQSAYSASKGAIVGMT--LPLARDFAGDGIRFNT 192
Query: 641 ICFGATDTPLLN 606
I G DTPLL+
Sbjct: 193 IAPGLMDTPLLS 204
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHL-FPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G ++N+SSVAA Q+ P Y +K+A+ Q++ C+ L+ GVRV S+ G +
Sbjct: 139 GEIVNVSSVAAGPQALAPSPYYAASKAALDQYTRCVALD--LILQGVRVNSVSPGVVTSG 196
Query: 614 LL 609
L
Sbjct: 197 FL 198
>AC006677-8|AAF39943.1| 278|Caenorhabditis elegans Dehydrogenases,
short chain protein15 protein.
Length = 278
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHLFPIYFG-TKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G ++N+SS+AA Q +++ Y+G K+ + Q + + LE VRV S+ G T
Sbjct: 141 GEIVNVSSIAAGPQPYIYYTYYGICKAGLDQLTRSLALE--LIPFDVRVNSVSPGLISTN 198
Query: 614 LLNGTKLG 591
L +G
Sbjct: 199 FLGAVGMG 206
>U41277-2|AAA82473.1| 274|Caenorhabditis elegans Hypothetical
protein C06E4.6 protein.
Length = 274
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -1
Query: 791 GTVLNISSVAA-LCQSHLFPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G ++NISS+ A P Y K+A+ Q+S C ++ G+R+ + G T
Sbjct: 141 GEIVNISSIGAGPAAQPASPYYSSAKAALDQYSRCAAID--LISEGIRINVVQPGFVSTG 198
Query: 614 LLNGTKLGSFDEEI 573
+ S DE +
Sbjct: 199 FSTAARGLSADESV 212
>U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical
protein C06E4.3 protein.
Length = 277
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -1
Query: 791 GTVLNISSVAALCQSHL-FPIYFGTKSAVLQFSNCIGLEEHYAKSGVRVLSICFGATDTP 615
G ++N+SSVAAL +H+ P Y K+A+ Q++ ++ G+RV ++ G T
Sbjct: 142 GEIVNVSSVAALKFAHVRNPYYPLAKAALDQYTRSAAID--LISQGIRVNTVNPGVVAT- 198
Query: 614 LLNGTKLGSFDEEIDGTCVEAIQKNY 537
F E G E QK Y
Sbjct: 199 --------GFHESCTGLSTEESQKFY 216
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 255 CSHAPKILRHFCARVICNIMFSVKVK*TKGTPPLPPDR 142
C H+ K + H+C R CN+ V+V T T P P R
Sbjct: 396 CQHSVKYMAHYC-RKACNLC-EVEVTTTTTTTPKPVPR 431
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 711 GAAVQQLYWVRRTLR*KRRPSTEYLLW 631
G A+ L+W+RRT+ RP L+W
Sbjct: 393 GTAIAALFWLRRTMPDASRPIKVPLIW 419
>U67949-5|AAB07566.1| 705|Caenorhabditis elegans Hypothetical
protein F55A4.5 protein.
Length = 705
Score = 27.9 bits (59), Expect = 9.4
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Frame = -1
Query: 605 GTKLGSFDEEIDGTCVEA-IQKNYPIQKMESAAKGLVE----AYEHAKSGDTWI----IT 453
G KL + I+G + I + YP+ K ++AAK L EH D I
Sbjct: 227 GPKLQAVIVNINGKSIATGIGETYPLAKQDAAAKALAVLSPLLREHQNGSDNGFGKENIP 286
Query: 452 TNKPAKNITDTVKKSYELLSYHVF 381
+K I+D +K+Y+L VF
Sbjct: 287 VHKQKSVISDIHEKAYQLKVNVVF 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,244,463
Number of Sequences: 27780
Number of extensions: 464853
Number of successful extensions: 1266
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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