Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19f21f
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    30   0.022
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.63 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   5.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = -3

Query: 248 RKSSSTVTSHL*NFTQLGPYFVLSSFSRALPESSATSKIATCLTPRSNISRTTPSPIPLA 69
           R+ S T T     ++Q G +F+        P  +AT +++TC   R+ +     SP P+ 
Sbjct: 216 REYSPTFTQQQTQYSQYGSWFL--PHQPIYPAVTATVQLSTC--TRTTLKNNRASPYPMQ 271

Query: 68  APVISTIFP 42
            P  +++ P
Sbjct: 272 RPKSASLSP 280


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 430 VLF*IYLQWQRYVNLICSRFI 492
           +LF IYL WQ+  NL  S+ +
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLL 38


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 81  RRRSGPAYIGARCQACCYFGCCRG 152
           R   GP  + AR + CCY     G
Sbjct: 600 RNFHGPHRLAARSRRCCYHAVAPG 623


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 81  RRRSGPAYIGARCQACCYFGCCRG 152
           R   GP  + AR + CCY     G
Sbjct: 492 RNFHGPHRLAARSRRCCYHAVAPG 515


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 664  STQVPSISSSKLPSLVPFNSGVSVAPKQILSTR 566
            S+  PSIS+ +  SL      +S+AP ++   R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNRVSQAR 1437


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 664  STQVPSISSSKLPSLVPFNSGVSVAPKQILSTR 566
            S+  PSIS+ +  SL      +S+AP ++   R
Sbjct: 1405 SSNNPSISAFRKKSLAYVQQRMSIAPNRVSQAR 1437


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 286 LDVVINNAAIMNDSYKSYKKQIDINVTALVTGTLKAI 396
           + +++N A  + + +K  +K + I  +    GTL  I
Sbjct: 176 ITLIVNYALALKNRFKELQKYLKIETSCRYVGTLYRI 212


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +3

Query: 318 ERQL*ILQKTNRYKCDCFSYWYTESYRDYGKAECGKGGTVLNISSVAALCQS 473
           E Q   +Q  N+Y+C C   W T    D     C K   +  +  +  LC +
Sbjct: 109 ENQATCVQNKNQYQCLCGVGW-TGKVCDVEMVSC-KDAALRKVVPLKKLCNN 158


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 579 ICFGATDTPLLNGTKLGSFDEEIDGTC 659
           +C    DTP  +G KLG   +++   C
Sbjct: 197 VCING-DTPRRSGCKLGQVFDDVGKKC 222


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 676 FWMASTQVPSISSSKLPSLVP 614
           F  A    PS+S + LPS+ P
Sbjct: 186 FISALVNAPSVSPASLPSISP 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,356
Number of Sequences: 336
Number of extensions: 3998
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)