Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19f19f
(536 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4M1N0 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A4J9G4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_Q01H74 Cluster: Chromosome 01 contig 1, DNA sequence; n... 33 4.2
UniRef50_P53438 Cluster: Protein SOK2; n=2; Saccharomyces cerevi... 33 4.2
UniRef50_Q4RR30 Cluster: Chromosome 14 SCAF15003, whole genome s... 33 5.5
UniRef50_Q3UQI0 Cluster: 13 days embryo stomach cDNA, RIKEN full... 33 5.5
UniRef50_A0D039 Cluster: Chromosome undetermined scaffold_33, wh... 33 5.5
UniRef50_Q2UDP7 Cluster: Predicted protein; n=1; Aspergillus ory... 32 7.3
UniRef50_Q5P2D6 Cluster: Polysaccharide chain length determinant... 32 9.6
UniRef50_A5G112 Cluster: Globin precursor; n=1; Acidiphilium cry... 32 9.6
UniRef50_Q00SD2 Cluster: Galactosyltransferases; n=1; Ostreococc... 32 9.6
>UniRef50_A4M1N0 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 364
Score = 33.5 bits (73), Expect = 3.1
Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = -1
Query: 188 HSIPGIW-RHLSWHSGHAW 135
HS PG W R L WH GH W
Sbjct: 310 HSCPGHWDRQLQWHEGHMW 328
>UniRef50_A4J9G4 Cluster: Putative uncharacterized protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 228
Score = 33.1 bits (72), Expect = 4.2
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 31 FQKNSSSSHCVYLISCPVVQIKLS*CNVPHKIPATQACP-LCQDRC 165
F+ N SSS YL CP + K+ H I +++CP +C+D+C
Sbjct: 27 FKNNCSSSD--YLKKCPYLTRKIYAAKTYHFIGKSRSCPYICEDKC 70
>UniRef50_Q01H74 Cluster: Chromosome 01 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 01 contig 1, DNA
sequence - Ostreococcus tauri
Length = 87
Score = 33.1 bits (72), Expect = 4.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -1
Query: 227 DLTGRETRSRLHG-HSIPGIWRH----LSWHSGHAWVAGIL*GTLHY 102
D GR + SR+ HS+P +W+H +SG+AW A L G + Y
Sbjct: 11 DARGRASSSRVSPQHSLPALWKHAMQNYGRYSGYAWTAFALAGGVAY 57
>UniRef50_P53438 Cluster: Protein SOK2; n=2; Saccharomyces
cerevisiae|Rep: Protein SOK2 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 785
Score = 33.1 bits (72), Expect = 4.2
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +2
Query: 71 SVVRLSKSNYHNATSLTKFRLPKHAHYARTDAAKSRVWNAHAAWTWFPARSSPTTEHAT* 250
S + KSN N+T+++ +P + ++ + A +S ++ A+ ++PA TT AT
Sbjct: 129 SAITTKKSN--NSTNISN-NVPYYYYFPQMQAQQSMAYSYPQAYYYYPANGDGTTNGATP 185
Query: 251 RMLHASSYNPENKQHNPATFRSQ 319
+ NP N + +TF Q
Sbjct: 186 SVTSNQVQNP-NLEKTYSTFEQQ 207
>UniRef50_Q4RR30 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1063
Score = 32.7 bits (71), Expect = 5.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 134 PKHAHYARTDAAKSRVWNAHAAWTWFPARSSPTTEHAT*RMLHASSYNPENKQ 292
P A A + + R W A+W+ P++SS TT + + HA+ P+ Q
Sbjct: 581 PLTAPPATSSSTSGRAWTPSASWSRAPSKSSRTTRSSPSSVKHAAKQLPQLPQ 633
>UniRef50_Q3UQI0 Cluster: 13 days embryo stomach cDNA, RIKEN
full-length enriched library, clone:D530003P12
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: 13 days embryo stomach cDNA, RIKEN
full-length enriched library, clone:D530003P12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 159
Score = 32.7 bits (71), Expect = 5.5
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 136 QACPLCQ-DRCRQIPGMECPCSLDLVSRPVKSHHRTCHITHASCQQLQSGK*ATQPRHVS 312
Q C L + D C I G+ C SL P R C T + Q+ Q A +PR
Sbjct: 83 QTCVLARRDTCHSIYGLPCSVSLGF---PPDQRQRHCSGTQSLDQRTQERCTAREPREQV 139
Query: 313 IPVFSQNNLL 342
PVF + LL
Sbjct: 140 PPVFPRPALL 149
>UniRef50_A0D039 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; cellular organisms|Rep:
Chromosome undetermined scaffold_33, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2929
Score = 32.7 bits (71), Expect = 5.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 317 GIETWRGCVAYFPDCSCWHEACVMWHVLWWDLTGRETRSRLHGHS 183
G W VA PD AC+ + + WDL + R +L GHS
Sbjct: 2579 GDTMWIYSVAQSPDQQSLALACIDYSIRLWDLKSEKERQKLIGHS 2623
>UniRef50_Q2UDP7 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 1764
Score = 32.3 bits (70), Expect = 7.3
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = -1
Query: 302 RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETRSRLHGHSIPGIWRH 162
RG VA + + W +A ++ LWW ++ + L+ + +++H
Sbjct: 1062 RGLVAIYEETERWTKAKGVYETLWWTISSGDRNHMLNSELVEEVYQH 1108
>UniRef50_Q5P2D6 Cluster: Polysaccharide chain length determinant
protein; n=4; Betaproteobacteria|Rep: Polysaccharide
chain length determinant protein - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 514
Score = 31.9 bits (69), Expect = 9.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 212 ETRSRLHGHSIPGIWRHLSWHSGHAWVAGIL*GTLHY 102
E S++ GH + G+WR W AW+AGI G + Y
Sbjct: 3 ELFSQIAGH-VRGMWRFRWWGLAFAWIAGITGGFVIY 38
>UniRef50_A5G112 Cluster: Globin precursor; n=1; Acidiphilium
cryptum JF-5|Rep: Globin precursor - Acidiphilium
cryptum (strain JF-5)
Length = 144
Score = 31.9 bits (69), Expect = 9.6
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 193 CSLDLVSRPVKSHHRTCHITHASCQQLQSGK*ATQPRHVSIPVFSQNNLLIRISLVTT*I 372
C D+ +KS H+ +IT A+ L + T H IPV +QNNLL +++ + + +
Sbjct: 86 CKFDM---SMKSVHQGLNITQAAFNALANDLNITMDEH-DIPVAAQNNLLAKLAAMESQV 141
Query: 373 V 375
V
Sbjct: 142 V 142
>UniRef50_Q00SD2 Cluster: Galactosyltransferases; n=1; Ostreococcus
tauri|Rep: Galactosyltransferases - Ostreococcus tauri
Length = 313
Score = 31.9 bits (69), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 146 HYARTDA-AKSRVWNAHAAWTWFPARSS 226
HY TD A++R+ H AW+W PA +S
Sbjct: 281 HYVSTDELARARLVRVHGAWSWTPAVAS 308
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,344,384
Number of Sequences: 1657284
Number of extensions: 10006080
Number of successful extensions: 23763
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23749
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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