Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19f12r
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 194 5e-50
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 194 5e-50
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 135 3e-32
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 123 1e-28
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 112 3e-25
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 2e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 2e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 2e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical ... 33 0.33
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 32 0.44
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 32 0.58
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 32 0.58
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 30 2.3
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 2.3
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 30 2.3
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 30 2.3
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 30 2.3
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 2.3
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 2.3
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 30 2.3
Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical pr... 29 5.4
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 28 7.1
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 28 7.1
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 9.4
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 9.4
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 9.4
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 9.4
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 9.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 9.4
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 9.4
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 9.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 9.4
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 9.4
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 28 9.4
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 28 9.4
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 194 bits (474), Expect = 5e-50
Identities = 96/185 (51%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = -3
Query: 800 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 621
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 620 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 441
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 440 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG-QQSGISFG 267
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG SG++ G
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMG 187
Query: 266 NRRQM 252
N R M
Sbjct: 188 NTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 194 bits (474), Expect = 5e-50
Identities = 96/185 (51%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = -3
Query: 800 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 621
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 620 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 441
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 440 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG-QQSGISFG 267
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG SG++ G
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMG 187
Query: 266 NRRQM 252
N R M
Sbjct: 188 NTRHM 192
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 135 bits (327), Expect = 3e-32
Identities = 66/134 (49%), Positives = 89/134 (66%)
Frame = -3
Query: 800 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 621
R GI + + SK+ D+ A LEWI+KL+GE +TSG+ DN + +LKDGTLLCK
Sbjct: 4 RTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCK 63
Query: 620 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 441
N ++ GS+KK+ + F CMENINAF+E KK GVP +ETFQ+++L E ++L+SV V
Sbjct: 64 AANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCV 123
Query: 440 CLQSLGRKAGNFGK 399
L SLGR GK
Sbjct: 124 TLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 123 bits (297), Expect = 1e-28
Identities = 69/144 (47%), Positives = 87/144 (60%)
Frame = -3
Query: 797 AGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKL 618
AG AG + QA SK+ND A LEWIR LT E + DN E LKDG LCKL
Sbjct: 11 AGMAGAILDKQA---SKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKL 67
Query: 617 VNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVC 438
VN ++ GSVKKI + F C+ENIN F A + LGV +ETFQ++DL++ ++L+SV V
Sbjct: 68 VNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVT 127
Query: 437 LQSLGRKAGNFGKPSIGPKEADKN 366
LQSL RK G PK+ K+
Sbjct: 128 LQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 112 bits (269), Expect = 3e-25
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 11/189 (5%)
Frame = -3
Query: 785 GINAEAQARIHSKYNDEIAQETLEWIRKLTGE----PANTSGDADNLYEVLKDGTLLCKL 618
G++ E Q + +++ E A E L+WI +TGE T + ++ +LKDG +LCKL
Sbjct: 9 GLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKL 68
Query: 617 VNELQPGSVKKINQTT-MAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 441
+ +L P N+ MAF MENI+ FL A K+ GV FQT+DL+E + Y V+
Sbjct: 69 IEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIE 128
Query: 440 CLQSLG----RKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNK-GQQSGI 276
CL+ L ++ + P+ K A + R F E ++ G+ VI LQYGTNK Q G+
Sbjct: 129 CLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGM 188
Query: 275 S-FGNRRQM 252
S +G RQ+
Sbjct: 189 SPYGLPRQI 197
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = -3
Query: 713 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 546
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 545 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 426
IN F K + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = -3
Query: 713 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 546
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 545 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 426
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = -3
Query: 713 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 546
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 545 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 426
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 647 LKDGTLLCKLVNELQPGSVKKINQTTMAF---KCMENINAFLEAVKKLGVPAQETFQTID 477
L DG LCK +N+L P S+ + T + + N++ FL+ +K+GVP +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 476 LWERQN 459
+ ++N
Sbjct: 608 IISKRN 613
>AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical
protein C46E10.3 protein.
Length = 392
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 304 PYCSDITF*PAFSCSSEKSRTFLSASLGPMDGLPKLPAFLP 426
P CS I F P+ + SS S + + L +D L K+P+F P
Sbjct: 229 PQCSVINFVPSLAISSLPSTSIPATILPKIDNLAKVPSFAP 269
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 662 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 516
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 662 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 516
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -3
Query: 662 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 516
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -3
Query: 746 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 573
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 572 TMAFKC--MENINAFLEAVKKLGV 507
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -3
Query: 746 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 573
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 572 TMAFKC--MENINAFLEAVKKLGV 507
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 405 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 464
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 465 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 520
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = -3
Query: 584 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 414
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 413 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 252
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical
protein C14C10.3a protein.
Length = 677
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = +2
Query: 71 LEQPMYITLECNDDAVHCVI*SYVTLAGRRSSPFINNTHMKK 196
+ + + ++++C D+AVH V+ + + G+++ F+ KK
Sbjct: 579 VNKSVIVSVKCLDEAVHGVLDKFYGIGGQKTKKFVEKNIKKK 620
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 341 AAPRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPERARLAS 520
+APR + + P AR T RS P+ R V R + A+P + R+P AR A
Sbjct: 320 SAPRALTSRAPAGP-ARPTTTRSATPATRTAVPPRATAPPKAAPASKAPTRAPIPARSAP 378
Query: 521 *LPLGKRLCSP 553
P G +P
Sbjct: 379 APPRGAPAKAP 389
>Z11126-7|CAO82061.1| 522|Caenorhabditis elegans Hypothetical
protein ZK643.3b protein.
Length = 522
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 254 FDACCRRICPTAGPC*CRTVAISRSDRLSAAPRRSRAHSCPPPWARWTACRSYLPSYRGT 433
FD + C A C CR + R+ +P CPP W W S P G
Sbjct: 115 FDLIVKDCCSAARYC-CRNTLVKYHHRVDDSP-------CPPTWDGWNCFDSATP---GV 163
Query: 434 VDKRPPS 454
V K+ P+
Sbjct: 164 VFKQCPN 170
>Z11126-6|CAA77471.2| 480|Caenorhabditis elegans Hypothetical
protein ZK643.3a protein.
Length = 480
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +2
Query: 254 FDACCRRICPTAGPC*CRTVAISRSDRLSAAPRRSRAHSCPPPWARWTACRSYLPSYRGT 433
FD + C A C CR + R+ +P CPP W W S P G
Sbjct: 115 FDLIVKDCCSAARYC-CRNTLVKYHHRVDDSP-------CPPTWDGWNCFDSATP---GV 163
Query: 434 VDKRPPS 454
V K+ P+
Sbjct: 164 VFKQCPN 170
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = -3
Query: 644 KDGTLLCKLVNELQPGSVK----KINQTTMAFKCME--NINAF-LEAVKKLGVPA 501
KDG +L KL N L+PG+V+ + N A K ++ NI+AF A K LG A
Sbjct: 162 KDGDVLAKLANALEPGAVEVAAAEENADAAAQKEVQKKNIDAFGAWAQKTLGTEA 216
>Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical
protein R11H6.3 protein.
Length = 387
Score = 28.3 bits (60), Expect = 7.1
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 224 YFINRVIKITFDACCRRICPTAGPC*CRTVAISRS-DRLSAAPRRSRAHSCPPPWARWTA 400
YF++ V+ C R P A C TV +S DRL AAPRR + P R +
Sbjct: 261 YFVDHVV---IQDCVRGF-PEA--CRAWTVLVSSIVDRLRAAPRRGSFLNSPSSSRRGSM 314
Query: 401 CRSYLPSYRGTVDKRPPSKGSAS 469
C S S K P SA+
Sbjct: 315 CTSSQLSINDEAPKCPFMSKSAN 337
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.1
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = -3
Query: 806 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 633
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 632 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 477
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.1
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = -3
Query: 806 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 633
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 632 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 477
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Frame = +2
Query: 320 SRSDRLSAA--PRRSRAHSCPPPWARWTACRSYLPSYRGTVDKR---PPSKGSASPKDQW 484
SRS R S + PRRSR+ + PP + R P R R PP + SPK++
Sbjct: 123 SRSPRYSRSRSPRRSRSRTRSPP----SRDRRDSPDRRDNSRSRSRSPPPREDGSPKERR 178
Query: 485 S-----GRSPERAR 511
S RSP R+R
Sbjct: 179 SRSRSASRSPSRSR 192
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 428 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 480
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 538 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 590
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1442 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1494
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 1448 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 1500
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 545 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 597
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 344 APRRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPER 505
A + R+ + PP T S LP Y G + PP K +P +Q G + E+
Sbjct: 618 AEPKIRSDALPPQQPICTLAIS-LPEYTGEIKTAPPPKKDLTPFEQRYGSALEK 670
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,952,890
Number of Sequences: 27780
Number of extensions: 417494
Number of successful extensions: 1311
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -