Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19f12f
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    31   0.038
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    26   1.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   2.5  
AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    25   3.3  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    25   3.3  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.3  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   7.6  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 31.1 bits (67), Expect = 0.038
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 419 SLGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKGQQSGISFGNRRQM 598
           S G   GN G+P I PK +  +V +     LK+G    ++   +     S IS  NR Q+
Sbjct: 161 SSGANDGNNGRPEISPKLSPGSVVESVSRSLKSGNPSTAVSSSSTNNNTSNIS--NRNQV 218


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -1

Query: 500 RRSRAHSCPPPWARWTACRSYLPSYRGTVDKRPPSKGSASPKDQWSGRSPERAR 339
           RR+     P    RW +CRS  P+ R +   RP S   + P  +   R P R R
Sbjct: 254 RRNPRRRSPRSGGRWPSCRS-PPARRRSRSTRPTSWPRSRPTSK-PKRLPRRRR 305


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 406 DHRVKVLPLPKINGLEGLLSG 344
           D R+K+LPLP+ N +   L G
Sbjct: 241 DWRIKILPLPRWNTVLACLDG 261


>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
           protein AgamOBP49 protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +3

Query: 537 YSTALTRASSRAYPSATGVKCDFYYPIYKIETIKYVFFVLFHMCVIYERRASSPSQR 707
           + TA   A  RA  +   V+ D    +  + +    F +LFH+CV        P  R
Sbjct: 105 FDTAYKIAVERAVAACATVQEDIRRDVANVPSKCNAFALLFHVCVTQITLKHCPDDR 161


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +3

Query: 537 YSTALTRASSRAYPSATGVKCDFYYPIYKIETIKYVFFVLFHMCVIYERRASSPSQR 707
           + TA   A  RA  +   V+ D    +  + +    F +LFH+CV        P  R
Sbjct: 105 FDTAYKIAVERAVAACATVQEDIRRDVANVPSKCNAFALLFHVCVTQITLKHCPDDR 161



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 537 YSTALTRASSRAYPSATGVKCDFYYPIYKIETIKYVFFVLFHMCVIYERRASSPSQR 707
           Y  A   A ++A  +    K         +++   +F V FH CV  E   + P++R
Sbjct: 240 YDQAYQEAIAKAVTACMAQKDKIREEADVVQSECSMFAVKFHACVSLETMRNCPAER 296


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 401 PSKGSASPKDQWSGRSPERARLAS*LPLGKRLCSP 297
           PS  +A+     SG   + ARL+S LPL   +  P
Sbjct: 235 PSSAAAAMLSASSGGQQQHARLSSSLPLSSVIGGP 269


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 537 YSTALTRASSRAYPSATGVKCDFYYPIYKIETIKYVFFVLFHMCVIYERRASSPSQR 707
           Y  A   A ++A  +    K         +++   +F V FH CV  E   + P++R
Sbjct: 91  YDQAYQEAIAKAVTACMAQKDKIREEADVVQSECSMFAVKFHACVSLETMRNCPAER 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,220
Number of Sequences: 2352
Number of extensions: 16273
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)