Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19f11r
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical p...    31   0.68 
AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical...    31   0.68 
Z81104-10|CAB03214.1|  293|Caenorhabditis elegans Hypothetical p...    31   0.90 
AL033510-11|CAA22071.1|  293|Caenorhabditis elegans Hypothetical...    31   0.90 
U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical p...    28   8.4  
U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical p...    28   8.4  

>Z82278-10|CAC15860.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -3

Query: 216 CLQCQDQIPMTI*LIQSLSVLLFTPVTTATLRYVNDEEPTPSTSSGATINLI 61
           C+  Q+  P T   + + + +   PVTT T      EEPT +T++    N +
Sbjct: 21  CIPSQEIEPFTTTAVPTTTTIPIDPVTTTTTTTTTTEEPTTTTTAPFCANCL 72


>AL132943-14|CAC14395.2|  390|Caenorhabditis elegans Hypothetical
           protein Y116F11B.2 protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -3

Query: 216 CLQCQDQIPMTI*LIQSLSVLLFTPVTTATLRYVNDEEPTPSTSSGATINLI 61
           C+  Q+  P T   + + + +   PVTT T      EEPT +T++    N +
Sbjct: 21  CIPSQEIEPFTTTAVPTTTTIPIDPVTTTTTTTTTTEEPTTTTTAPFCANCL 72


>Z81104-10|CAB03214.1|  293|Caenorhabditis elegans Hypothetical
           protein Y40H7A.8 protein.
          Length = 293

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 733 SQTLFPSSSILIVSTFHLL*PRTDAYCLY*ILYTKYKNIHIHWSPQYIIIYRGLKVY 563
           S  +  +S  L    FH+    T   C + +   K +N +  W+  YI++Y G+ VY
Sbjct: 76  SNVILTTSQFLQSFFFHVQSLSTIVICTHRLSAAKLENANKIWNRYYILVYLGILVY 132


>AL033510-11|CAA22071.1|  293|Caenorhabditis elegans Hypothetical
           protein Y40H7A.8 protein.
          Length = 293

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -2

Query: 733 SQTLFPSSSILIVSTFHLL*PRTDAYCLY*ILYTKYKNIHIHWSPQYIIIYRGLKVY 563
           S  +  +S  L    FH+    T   C + +   K +N +  W+  YI++Y G+ VY
Sbjct: 76  SNVILTTSQFLQSFFFHVQSLSTIVICTHRLSAAKLENANKIWNRYYILVYLGILVY 132


>U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical
           protein F42G9.1b protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -3

Query: 111 DEEPTPSTSSGATINLI*GVALLENDSDDGDTSF 10
           D E  PS+SSG       GVA  E D DD D  F
Sbjct: 223 DAETAPSSSSGVD-----GVATEEEDEDDSDKEF 251


>U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical
           protein F42G9.1a protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -3

Query: 111 DEEPTPSTSSGATINLI*GVALLENDSDDGDTSF 10
           D E  PS+SSG       GVA  E D DD D  F
Sbjct: 245 DAETAPSSSSGVD-----GVATEEEDEDDSDKEF 273


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,126,118
Number of Sequences: 27780
Number of extensions: 314266
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)