Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19f09r
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro...    29   5.7  
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro...    29   5.7  
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P...    29   5.7  

>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p protein.
          Length = 1455

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/74 (28%), Positives = 27/74 (36%)
 Frame = +1

Query: 136  CKRPEYAF*RPQICTVKKCSSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTG 315
            C R  +   RP +CTV +    R +KL+ H             C  C  S   S D +  
Sbjct: 1343 CHRRTHTGERPHVCTVCQKGFARSYKLQQH--MRIHSGERPYKCTYCEKSFTQSNDLTLH 1400

Query: 316  RRRESHVENPPVNC 357
             RR  H    P  C
Sbjct: 1401 IRR--HTGERPYQC 1412


>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p protein.
          Length = 1454

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/74 (28%), Positives = 27/74 (36%)
 Frame = +1

Query: 136  CKRPEYAF*RPQICTVKKCSSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTG 315
            C R  +   RP +CTV +    R +KL+ H             C  C  S   S D +  
Sbjct: 1342 CHRRTHTGERPHVCTVCQKGFARSYKLQQH--MRIHSGERPYKCTYCEKSFTQSNDLTLH 1399

Query: 316  RRRESHVENPPVNC 357
             RR  H    P  C
Sbjct: 1400 IRR--HTGERPYQC 1411


>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
            protein.
          Length = 1266

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 21/74 (28%), Positives = 27/74 (36%)
 Frame = +1

Query: 136  CKRPEYAF*RPQICTVKKCSSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTG 315
            C R  +   RP +CTV +    R +KL+ H             C  C  S   S D +  
Sbjct: 1154 CHRRTHTGERPHVCTVCQKGFARSYKLQQH--MRIHSGERPYKCTYCEKSFTQSNDLTLH 1211

Query: 316  RRRESHVENPPVNC 357
             RR  H    P  C
Sbjct: 1212 IRR--HTGERPYQC 1223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,332,930
Number of Sequences: 53049
Number of extensions: 421480
Number of successful extensions: 1285
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)