Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19f08r
(796 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 98 7e-21
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 96 2e-20
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 53 2e-07
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 32 0.54
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 30 1.7
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 97.9 bits (233), Expect = 7e-21
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Frame = -1
Query: 709 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCI-IDDAVGVWRV 533
R+VGG T +P AAL RN +T + +CG+SIL+ ++TAAHC D+ V + V
Sbjct: 26 RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 532 RVGSTWGNS----GGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIP 365
VG W N+ + ++ R +P Y + +DIAI+ N QP +P
Sbjct: 83 VVGD-WDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLP 140
Query: 364 GSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHVQVWVVNQSVC-RSRYGGNTITNNMLCA 188
++ + +GWG G +E+L+ + ++N+ C S ++++ + CA
Sbjct: 141 SKDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCA 198
Query: 187 GWLDVGGRDSCTGDSGGPLY-----HXXXXXXXXXXXXNCGHARYPGVYARVSRYTSWIQ 23
G+L+ GG DSC GDSGGP C + PG+Y V+ Y SWI
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWIS 257
Query: 22 S 20
+
Sbjct: 258 A 258
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 96.3 bits (229), Expect = 2e-20
Identities = 78/237 (32%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Frame = -1
Query: 709 RIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGV-WRV 533
R++GGS ++ + +P LL CG S+++ VLTAAHC D + V
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLG----HHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSV 112
Query: 532 RVGSTWGNSGGVVHHVNRHIIHPNYG-RWSRDNDIAIMRTSSNINYVNNAVQPARIPGSN 356
RVG SG H V IHP Y + D AIMR +N + +P +P +
Sbjct: 113 RVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVN-TSTTARPICLP--S 168
Query: 355 YNLGDNQVVWAAGWGVTRFGGSLS-EQLRHVQVWVVNQSVCRS--RYGGNTITNNMLCAG 185
+N++ GWG T G SLS LR + V +++ C S Y G +MLCAG
Sbjct: 169 LPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAG 228
Query: 184 WLDVGGRDSCTGDSGGPLY----HXXXXXXXXXXXXNCGHARYPGVYARVSRYTSWI 26
+ G DSC GDSGGPL C PGVY V ++WI
Sbjct: 229 Y-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 53.2 bits (122), Expect = 2e-07
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 25/256 (9%)
Frame = -1
Query: 715 SLRIVGGSTTTINRYPTIAALLMTRNWSTWSQNCGSSILNNRSVLTAAHCIIDDAVGVWR 536
S RI+GG++ I+ A L++ + CG++++++ ++TAAHC + +
Sbjct: 35 SFRIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSF- 91
Query: 535 VRVGSTWGNSGGVVHHVNRHIIHPNYGRWSRDNDIAIMRTSSNINYVNNAVQPARIPGSN 356
V V N+ V IH Y + DNDIA++R SS+++ + ++P + +
Sbjct: 92 VYVREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKL--GIKPVCLVHDD 148
Query: 355 YNL---GDNQVVWAAGWGVTRFGGSL-------SEQLRHVQVWVVNQSVCRSRYG----- 221
L N VV G+G+T S S+ L+ V +++ C +
Sbjct: 149 SKLLKQYKNGVV--IGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLL 206
Query: 220 GNTITNNMLCAGWLDVGGRDSCTGDSGGP-LYHXXXXXXXXXXXXNCG---------HAR 71
IT +CAG G + GDSGGP L H + G +
Sbjct: 207 SVKITGYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGK 263
Query: 70 YPGVYARVSRYTSWIQ 23
+PGVY R+S+Y WIQ
Sbjct: 264 FPGVYTRISKYVPWIQ 279
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 31.9 bits (69), Expect = 0.54
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 631 TWSQNCGSSILNNRSVLTAAHC 566
TWS++C ++ + R +LTA HC
Sbjct: 70 TWSKHCSGTLTSPRHILTATHC 91
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.7
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Frame = -1
Query: 439 NDIAIMRTSSNINYVNNAVQPAR--IPGSNYNLGDNQVVWAAGWGVTRFGGSLSEQLRHV 266
NDI I+ S I+ V A +P N G N V + GWG G + +
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGAN--VTSFGWGSDPGKGFDNAAFPMI 233
Query: 265 QVWVV---NQSVCRSRYGGNTITNNMLCAGWLDVGGRDSCTGDSGGPL 131
QV + + C +G +I + C + ++ C+GDSGG L
Sbjct: 234 QVLTLATETLATCEENWG-TSIPFDSFCTA--EEEDKNVCSGDSGGGL 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,914,939
Number of Sequences: 27780
Number of extensions: 424224
Number of successful extensions: 1328
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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