Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e22f
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical pr... 229 1e-60
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 29 3.8
U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical pr... 29 3.8
U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical pr... 29 3.8
U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL110485-13|CAB60361.2| 314|Caenorhabditis elegans Hypothetical... 28 6.6
AJ306734-1|CAC37332.1| 314|Caenorhabditis elegans spermidine sy... 28 6.6
AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical ... 28 6.6
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 28 8.8
AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp... 28 8.8
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp... 28 8.8
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical... 28 8.8
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical... 28 8.8
AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical
protein C54G4.8 protein.
Length = 285
Score = 229 bits (561), Expect = 1e-60
Identities = 111/198 (56%), Positives = 137/198 (69%)
Frame = +2
Query: 191 LLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFR 370
L++ALE SV ASG HP PW HSG FSS D ASVRRGYEVYKQVC ACHS++++ +R
Sbjct: 27 LVYALENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFLHYR 86
Query: 371 NLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSXXXXXXXXXXXXXXXX 550
+ V+ TE+EAKAEAA+ +I D D++G +RPG L+D LP+
Sbjct: 87 HFVDTIMTEEEAKAEAADALIND-VDDKGASIQRPGMLTDKLPNPYPNKKAAAAANNGAA 145
Query: 551 XXDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVLFDEAA 730
DLSL+ R GG+DY+F+LLTGY+E PAGV + +G+ YNPYFPGG ISM Q LFDE
Sbjct: 146 PPDLSLMALARHGGDDYVFSLLTGYLEAPAGVKVDDGKAYNPYFPGGIISMPQQLFDEGI 205
Query: 731 EYSDGTPATASQLAKDVA 784
EY DGTPAT SQ AKDV+
Sbjct: 206 EYKDGTPATMSQQAKDVS 223
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 207 SSAKSRAPTPPPTTPKVDS 151
SS++SR+P PPP P+ DS
Sbjct: 508 SSSRSRSPPPPPRRPRQDS 526
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 187 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 74
S T + S+S F +++ WW DKPE LD I
Sbjct: 11 SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 187 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 74
S T + S+S F +++ WW DKPE LD I
Sbjct: 11 SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48
>U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical
protein C34F11.3a protein.
Length = 740
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +2
Query: 206 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 385
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 170 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 227
Query: 386 THTEDEAKAEAAEVMIKDGP 445
T E E MI DGP
Sbjct: 228 TKEEFLNDTEKLTAMIVDGP 247
>U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical
protein C34F11.3c protein.
Length = 803
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +2
Query: 206 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 385
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 233 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 290
Query: 386 THTEDEAKAEAAEVMIKDGP 445
T E E MI DGP
Sbjct: 291 TKEEFLNDTEKLTAMIVDGP 310
>U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical
protein C34F11.3b protein.
Length = 764
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/80 (28%), Positives = 32/80 (40%)
Frame = +2
Query: 206 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 385
E +VQ S + PP + W + + R ++C S+ F+N VNV
Sbjct: 194 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 251
Query: 386 THTEDEAKAEAAEVMIKDGP 445
T E E MI DGP
Sbjct: 252 TKEEFLNDTEKLTAMIVDGP 271
>Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical
protein F35B12.6 protein.
Length = 219
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 228 PDACTDCSSAKSRAPTPPPTTPKVDSH 148
PD +D S+ +S +P PP P+ D H
Sbjct: 84 PDTISDDSADQSGSPNSPPFVPQGDGH 110
>AL110485-13|CAB60361.2| 314|Caenorhabditis elegans Hypothetical
protein Y46G5A.19 protein.
Length = 314
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 629 EPPAGVVLREGQNYNPYFPGGAISM--AQVLFDEAAEYSD 742
E P V+ +GQ +PG A S+ +VLF E ++Y D
Sbjct: 26 EEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEKSKYQD 65
>AJ306734-1|CAC37332.1| 314|Caenorhabditis elegans spermidine
synthase protein.
Length = 314
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 629 EPPAGVVLREGQNYNPYFPGGAISM--AQVLFDEAAEYSD 742
E P V+ +GQ +PG A S+ +VLF E ++Y D
Sbjct: 26 EEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEKSKYQD 65
>AC091267-1|AAK31565.1| 789|Caenorhabditis elegans Hypothetical
protein Y37B11A.1 protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 647 LHQQEVPCNQSVARRCNLRRPYVPSRSETS 558
++ PCNQS+ +C + P +P R + S
Sbjct: 675 MNDPNAPCNQSIPPKCPKKVPVLPVRQKRS 704
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 650 LREGQNYNPY-FPGGAISMAQVLFDEAAEYSDGTPATASQL 769
LR Q N Y F GGA+S + + A +S TPA+AS +
Sbjct: 44 LRVMQTTNKYEFTGGAVSSPVLPVLQTAAFSPITPASASDM 84
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 650 LREGQNYNPY-FPGGAISMAQVLFDEAAEYSDGTPATASQL 769
LR Q N Y F GGA+S + + A +S TPA+AS +
Sbjct: 64 LRVMQTTNKYEFTGGAVSSPVLPVLQTAAFSPITPASASDM 104
>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1121
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 623 YMEPPAGVVLREGQNYNPYFPGGAISMAQVLF 718
++ PP+G + E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
transporting ATPase protein.
Length = 1045
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 623 YMEPPAGVVLREGQNYNPYFPGGAISMAQVLF 718
++ PP+G + E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
protein Y105E8A.12b protein.
Length = 1045
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 623 YMEPPAGVVLREGQNYNPYFPGGAISMAQVLF 718
++ PP+G + E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
protein Y105E8A.12a protein.
Length = 1121
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 623 YMEPPAGVVLREGQNYNPYFPGGAISMAQVLF 718
++ PP+G + E QN++ + AISMA V+F
Sbjct: 306 HIPPPSGRLQTELQNFSTFISIVAISMATVVF 337
>AF000265-4|AAK68198.1| 457|Caenorhabditis elegans Hypothetical
protein C18E3.6 protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 234 SEPDACTDCSSAKSRAPTPPPTTP 163
S+P A C+ APTPPP P
Sbjct: 204 SDPGATPMCNRKSGGAPTPPPPPP 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,498,180
Number of Sequences: 27780
Number of extensions: 423082
Number of successful extensions: 1365
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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