Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e19f
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.40 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.93 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.7  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   5.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.7  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 374 LKIGCFYFFPLFNLW-QVRLYTLCFSVFV 291
           + IGC   + +FN W Q R Y+  FSVF+
Sbjct: 50  ITIGCLCIWSIFNKWNQFRSYS-NFSVFL 77


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = -1

Query: 404 FNFLLFSFNGLKIGCFYFFPLFNLWQVRLYTLCFSVFVHFSPKLFAGVIIFEILLAFCVI 225
           + F+LF+ + L + C Y+F     + + L   C   F+ F+  L   + I+    A  ++
Sbjct: 243 YAFILFTVHLLLLVCIYYF-----YYMHLLFCC--AFIIFTMHLLFLLCIYYFYCALIIL 295

Query: 224 KTIFIQTFVRLFLFCKT 174
             I+   F R F+   T
Sbjct: 296 LCIYY--FCRAFIIFPT 310


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 226 ITQNARSISKIITPAKSFGEKCTKTEKQRVYN 321
           + Q   S+   +  AK+F ++C K ++Q   N
Sbjct: 683 LLQMVISMDSTVEEAKTFVDRCYKMQEQFTLN 714



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 54  EVYYNLI*LSLINI 13
           +VYY  + +SLINI
Sbjct: 178 DVYYEFLLISLINI 191



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 227 SRKMRGVFRKL*HLQKVLGKSVQR-QKSKGY 316
           S KMR   +KL  + ++LG++++   K  GY
Sbjct: 605 SPKMRHELQKLAQVYRILGETIETWNKLFGY 635


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 300 CLCTLFPKTFCR 265
           C CT+ PK F R
Sbjct: 8   CKCTICPKAFSR 19


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 272 FAGVIIFEILLAFCVIKTIFIQTFVRLFL 186
           F   I+  I L +     I I TF++LFL
Sbjct: 209 FQRKILLMIQLYYLYFDVIVISTFLQLFL 237


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 272 FAGVIIFEILLAFCVIKTIFIQTFVRLFL 186
           F   I+  I L +     I I TF++LFL
Sbjct: 135 FQRKILLMIQLYYLYFDVIVISTFLQLFL 163


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 207 LDKNGFDHAKCEEYF 251
           LDK+ F H   ++YF
Sbjct: 332 LDKDAFIHRTVDDYF 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,489
Number of Sequences: 336
Number of extensions: 2582
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)