Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e13r
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   3.2  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   7.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.9  
AY752903-1|AAV30077.1|   93|Anopheles gambiae peroxidase 9 protein.    23   9.9  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 740 HDDQEHWIPAPRGLREHREQHLRNSKQLRHLARRQIHGEQPQETTQKVQEAVK 582
           H D   W P  R LRE+ ++     +Q   L  R I   + +    ++ +A+K
Sbjct: 283 HRDLFWWTPLLRLLRENCDRARDRMRQTSDLQERSIAAAEHRTARAELGKAIK 335


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 638 DDEPGAEAVCCFVDAVHDVHEGRVGQVSSVPGRR 739
           D E GA      +DA+ +     V +VSS P RR
Sbjct: 644 DAEAGAAVPEAVLDAIPEAMPEAVPEVSSTPVRR 677


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -1

Query: 740 HDDQEHWIPAPRGLREHREQHLRNSKQLRHLARRQIHGEQPQETTQKVQEAVK 582
           H D   W P    LR++ EQ     +Q   L  R +   Q +    ++  A++
Sbjct: 346 HRDVYWWTPLIALLRQNCEQTRDRMQQTSDLQNRSLAAAQYRTAKAELDRAIR 398


>AY752903-1|AAV30077.1|   93|Anopheles gambiae peroxidase 9 protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -2

Query: 178 VPLVSYKNISYENKSERYGRWYNLIKKNIVY 86
           + +  Y++I+Y      +  W N++K  ++Y
Sbjct: 17  INIAQYQHINYYEWLPIFLGWENMVKNRLIY 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,633
Number of Sequences: 2352
Number of extensions: 12106
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)