Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e13r
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.3  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   7.0  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 541 ITAASM*NQRRKLSRFQFRKKKHPLLTIFDRTFLLS*LTKQISVEPKIS 395
           I A  M  + + LS F+   +    +T+F RT ++  L K     PK++
Sbjct: 634 IMALGMIGEPKILSVFEPYLEGKQQMTVFQRTLMVGSLGKLTETNPKLA 682


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 471 GCFFFLN*KRESFLLWFYMEAAVIVLN 551
           G F+F++   ++ LLW + E   I +N
Sbjct: 101 GNFYFVHESLKNVLLWDFQECTFISVN 127


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 596 VLFE*FPAAVLHGSD 640
           VLFE FP  ++ GSD
Sbjct: 207 VLFEIFPFCIVFGSD 221


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 33  CKNYVSCLHFVIVDFIFVYTIFFFIKLYHLPYRSLLFSYDI 155
           C+N+ +C       FI   T+FF   +Y  P  S  FS D+
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFF---IYVQP--SATFSLDL 148


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 33  CKNYVSCLHFVIVDFIFVYTIFFFIKLYHLPYRSLLFSYDI 155
           C+N+ +C       FI   T+FF   +Y  P  S  FS D+
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFF---IYVHP--SATFSLDL 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,177
Number of Sequences: 438
Number of extensions: 3771
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)