Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e13f
         (769 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    27   0.84 
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    27   0.84 
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    26   1.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    26   1.5  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   7.9  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 33  ESRKTRNIICCIFYFLLP*ILVAF 104
           E RKT +I+  I  F+LP I++AF
Sbjct: 263 EMRKTFSIVTSILQFVLPFIIMAF 286


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +1

Query: 337 FSEDDKIYEN--IEKEIAGLEIGTLVNNVGVSYTYPEYFLDLPE 462
           +  D   YE   +E+ +A L+ GT    V  +  YPEYF  + E
Sbjct: 117 YKPDHAQYEGKVVERWLAELQAGTFHEVVEFARDYPEYFARVEE 160


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 592 IIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGI 690
           ++PS +  VY    A   +F+E  D++YS K +
Sbjct: 439 LVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEV 471


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 592 IIPSPLLTVYAATKAYVDKFSEGLDMEYSKKGI 690
           ++PS +  VY    A   +F+E  D++YS K +
Sbjct: 470 LVPSKVNDVYFLRMAVCSRFTEPADIDYSWKEV 502


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 488 IRVGMSLSHSGRSKKYSGYV 429
           IRVG  + HS R+ KY G V
Sbjct: 696 IRVGDHVVHSSRTLKYLGMV 715


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = +1

Query: 1    DFFNLTKMALSNLEKLGILFVAFFIFYCLKFLWHFLYTYAIGP 129
            D +  ++   + L+ L ++F+  F   CL  ++   Y Y I P
Sbjct: 1643 DHYKQSETFSAVLDYLNMIFICIFSSECLMKIFALRYHYFIEP 1685


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,183
Number of Sequences: 2352
Number of extensions: 15244
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)