Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e12r
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 332 1e-90
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 330 4e-90
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 330 5e-90
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 328 1e-89
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 321 2e-87
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 321 2e-87
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 318 1e-86
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 202 2e-51
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 202 2e-51
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 202 2e-51
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 202 2e-51
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 201 3e-51
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 200 4e-51
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 200 4e-51
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 83 1e-15
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 83 1e-15
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 83 1e-15
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 83 1e-15
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 79 2e-14
AL034380-5|CAI21620.1| 131|Homo sapiens novel protein protein. 47 9e-05
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 30 8.8
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 332 bits (815), Expect = 1e-90
Identities = 152/256 (59%), Positives = 198/256 (77%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y +VDIRELI +DD MED+
Sbjct: 8 VMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ ++
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 330 bits (811), Expect = 4e-90
Identities = 151/256 (58%), Positives = 197/256 (76%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+
Sbjct: 8 VMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ ++
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 330 bits (810), Expect = 5e-90
Identities = 151/256 (58%), Positives = 196/256 (76%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+
Sbjct: 8 VMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM+ LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKHLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ ++
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 328 bits (807), Expect = 1e-89
Identities = 151/256 (58%), Positives = 196/256 (76%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+
Sbjct: 8 VMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ +
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIAL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 321 bits (789), Expect = 2e-87
Identities = 147/256 (57%), Positives = 195/256 (76%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+
Sbjct: 8 VMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ ++
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 321 bits (789), Expect = 2e-87
Identities = 147/256 (57%), Positives = 195/256 (76%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD MED+
Sbjct: 8 VMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDD 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++LV L
Sbjct: 68 SLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQLVQQL 127
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARKQI 260
+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMDLLSK A+K+I
Sbjct: 128 EQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEI 187
Query: 259 DNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIENIM 80
+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P + DEES+ ++
Sbjct: 188 EKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVL 245
Query: 79 LTVDNIIQYGEDADVK 32
+D IQYGED + K
Sbjct: 246 QHIDFAIQYGEDLEFK 261
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 318 bits (782), Expect = 1e-86
Identities = 151/266 (56%), Positives = 197/266 (74%), Gaps = 10/266 (3%)
Frame = -3
Query: 799 LVGPAGSGK----------STYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIREL 650
++GPAGSGK STYC+T+V+H R V VVNLDPAAEHF+Y + DIREL
Sbjct: 28 VMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIREL 87
Query: 649 IHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHL 470
I +DD MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHL
Sbjct: 88 IEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHL 147
Query: 469 PVMRRLVDLLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMD 290
PVM++LV L+ W FR+C VFLVDSQFM++ KF+SG +AALS M++LE+P VN++TKMD
Sbjct: 148 PVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMD 207
Query: 289 LLSKTARKQIDNYLDPDPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNI 110
LLSK A+K+I+ +LDPD + LL D + +K+ KLT+AI +++++S+VRF P +
Sbjct: 208 LLSKKAKKEIEKFLDPDMYSLLED--STSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQ 265
Query: 109 RDEESIENIMLTVDNIIQYGEDADVK 32
DEES+ ++ +D IQYGED + K
Sbjct: 266 SDEESMNIVLQHIDFAIQYGEDLEFK 291
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 202 bits (492), Expect = 2e-51
Identities = 105/252 (41%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 202 bits (492), Expect = 2e-51
Identities = 105/252 (41%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 202 bits (492), Expect = 2e-51
Identities = 105/252 (41%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 202 bits (492), Expect = 2e-51
Identities = 105/252 (41%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 201 bits (490), Expect = 3e-51
Identities = 105/252 (41%), Positives = 152/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + ++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVRLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 200 bits (489), Expect = 4e-51
Identities = 105/252 (41%), Positives = 152/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
+ GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 200 bits (489), Expect = 4e-51
Identities = 105/252 (41%), Positives = 152/252 (60%), Gaps = 3/252 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
+ GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L D M+
Sbjct: 14 VTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGLGDVMD-- 71
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRRLVDLL 440
L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +R + +
Sbjct: 72 ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGALRSIFSQM 131
Query: 439 QNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK-- 266
W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 132 AQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLAF 191
Query: 265 QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIRDEESIE 89
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+D+ESI+
Sbjct: 192 NLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQDKESIQ 249
Query: 88 NIMLTVDNIIQY 53
++ VD Y
Sbjct: 250 RVLQAVDKANGY 261
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 83.0 bits (196), Expect = 1e-15
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 24 VLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQY 83
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLVD 446
L GPNGG+V + D + + + + Y+L D PGQIE++T + +
Sbjct: 84 GL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITE 141
Query: 445 LLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL 284
L + +F V++++D+ + F+S + A S++ +LP + V+ K D++
Sbjct: 142 ALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDII 194
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 83.0 bits (196), Expect = 1e-15
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 8 VLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQY 67
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLVD 446
L GPNGG+V + D + + + + Y+L D PGQIE++T + +
Sbjct: 68 GL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITE 125
Query: 445 LLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL 284
L + +F V++++D+ + F+S + A S++ +LP + V+ K D++
Sbjct: 126 ALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDII 178
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 83.0 bits (196), Expect = 1e-15
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 24 VLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQY 83
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLVD 446
L GPNGG+V + D + + + + Y+L D PGQIE++T + +
Sbjct: 84 GL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITE 141
Query: 445 LLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL 284
L + +F V++++D+ + F+S + A S++ +LP + V+ K D++
Sbjct: 142 ALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDII 194
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 83.0 bits (196), Expect = 1e-15
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMEDE 620
++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 24 VLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQY 83
Query: 619 ELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLVD 446
L GPNGG+V + D + + + + Y+L D PGQIE++T + +
Sbjct: 84 GL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITE 141
Query: 445 LLQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLL 284
L + +F V++++D+ + F+S + A S++ +LP + V+ K D++
Sbjct: 142 ALAS-SFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDII 194
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 79.0 bits (186), Expect = 2e-14
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Frame = -3
Query: 442 LQNWNFRICVVFLVDSQFMIDGAKFLSGTMAALSVMVNLELPHVNVLTKMDLLSKTARK- 266
+ W+ R+ V LVDS + D AKF+S +L+ M+++ELPH+N+L+KMDL+ +
Sbjct: 60 MAQWDLRLTAVHLVDSHYCTDPAKFISVLCTSLATMLHVELPHINLLSKMDLIEHYGKLA 119
Query: 265 -QIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLVRFYPLNIR 107
+D Y + D LL + A + Y +L E + +++E++SLV F PLNI+
Sbjct: 120 FNLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLVSFIPLNIQ 172
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -3
Query: 799 LVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYE 674
++GP GSGK+TYC + + R V VVNLDPA E Y+
Sbjct: 14 VIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYD 55
>AL034380-5|CAI21620.1| 131|Homo sapiens novel protein protein.
Length = 131
Score = 46.8 bits (106), Expect = 9e-05
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = -3
Query: 307 VLTKMDLLSKTARKQIDNYLDP-DPHVLLSDMRNAHSKWHEKYAKLTEAIGEVVENFSLV 131
+L ++LL T+ +D Y + D LL + A + Y +L E + +++E++SLV
Sbjct: 1 MLAGLELL--TSAFNLDYYTEVLDLSYLLDHL--ASDPFFRHYRQLNEKLVQLIEDYSLV 56
Query: 130 RFYPLNIRDEESIENIMLTVDNIIQY 53
F PLNI+D+ESI+ ++ VD Y
Sbjct: 57 SFIPLNIQDKESIQRVLQAVDKANGY 82
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = +1
Query: 538 VAPLTSQNSLRGSLYKTLDHHLVQIAIPHLP*HHQGVLVL*CLRVAHSQSVQLLGPSLLH 717
+ P+ L LDHHLVQ+ H P H GV + + +++ P L
Sbjct: 796 LGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKSFINSIRRAINKYPPINLK 855
Query: 718 LQC 726
++C
Sbjct: 856 IKC 858
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,418,900
Number of Sequences: 237096
Number of extensions: 2504212
Number of successful extensions: 4903
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4868
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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