Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e12f
         (814 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    28   0.10 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      27   0.23 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    25   0.95 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.8  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 27.9 bits (59), Expect = 0.10
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = -1

Query: 271 FCLDLKHELLTRFIFFVRTNRLSLHSCLFSY-----RLFIFF 161
           FC  LK+ ++  ++  + T+ ++LH C  SY      +F FF
Sbjct: 37  FCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFF 78


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +1

Query: 235 TVLTTHVLDLNKKTMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIV 375
           TV  +H+L L+ +TM+YAQ +      G     S   K+A+ S++IV
Sbjct: 177 TVTPSHLLVLDDRTMKYAQKL----QPGDFLLVSDNAKNALISEKIV 219


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 519 LYTKH*TTIWSKLQFLIFHSIIKVY*FSDVYEWLIV 412
           LY+K   TI  K +  IF     V  F+D++ W+I+
Sbjct: 86  LYSKQIVTILKKTKSNIFILKESVDTFNDIFGWIIL 121


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -2

Query: 198 IAACFLIASLSFLNFELQDVFCKLYYC-YSQIY 103
           I   F +  L  +  +   +FC LY+C +  IY
Sbjct: 234 IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 266


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -2

Query: 204 LCIAACFLIASLSFLNFELQDVFCKLYYCYSQIYKIL 94
           +CI   +      F +  L DV+  L + + QI +IL
Sbjct: 246 ICITQFYYCYDSGFNSDNLTDVYFTLQWAFLQILEIL 282


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -2

Query: 198 IAACFLIASLSFLNFELQDVFCKLYYC-YSQIY 103
           I   F +  L  +  +   +FC LY+C +  IY
Sbjct: 59  IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 91


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 387 VYYIYNAFGVHCMFHYC 337
           VY +YN FG   M  +C
Sbjct: 69  VYAVYNIFGAFVMGLFC 85


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 547 EEQLGDVDDDYILFDCPGQIELYTHLPVMRRLV 645
           +E + D +  + LF  P +  LYT +   + LV
Sbjct: 93  DEPIDDYEPSFDLFYYPSRQTLYTPVQYFKDLV 125


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 55  QIVFLYNSSQW*DFDTD 5
           Q+ F Y  +QW  FD +
Sbjct: 820 QVPFAYRGNQWVGFDDE 836


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,263
Number of Sequences: 336
Number of extensions: 4512
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)