Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e11r
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 56 3e-08
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 54 1e-07
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 52 6e-07
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 39 0.005
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.55
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.55
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.55
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 2.2
Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 28 6.8
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 28 9.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 56.0 bits (129), Expect = 3e-08
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Frame = -1
Query: 724 IIHHEWVLTAAHCLANR---INFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 554
+I +VLTAAHC A ++ VR+G + + T IHP Y +G +
Sbjct: 88 LIDPNFVLTAAHCFAKDRRPTSYSVRVG-GHRSGSGSPHRVTAVSIHPWYN--IGFPSSY 144
Query: 553 DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLW 374
D A+++++ + S +P L + E + V+G+G T + +++ L
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPSLPA----VENRLCVVTGWGSTIE--GSSLSAPTLRE 198
Query: 373 VHLRGITNEQCLTHYPN--SRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDEDGQPTM 200
+H+ ++ C + PN R+ LCA Y S CQGDSGGPL + DG +
Sbjct: 199 IHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDS-CQGDSGGPL-MCARDGHWEL 255
Query: 199 VGVVSFGHRDGCNSP-HPSAY 140
GVVS+G GC P P Y
Sbjct: 256 TGVVSWG--IGCARPGMPGVY 274
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 54.0 bits (124), Expect = 1e-07
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 11/215 (5%)
Frame = -1
Query: 724 IIHHEWVLTAAHCLAN--RIN-FVVRLGLTNLTRPD-----YLVETTHKFIHPRYIEILG 569
I+ ++TAAHC R++ + V +G + + D + ++ H +P Y +I
Sbjct: 58 ILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIH--FYPLYKDIF- 114
Query: 568 GVQTDDIALVKLNHH-IPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVA 392
+ DIA++++ + I ++ Y QP L + + + G VSG+G G+
Sbjct: 115 ---SHDIAILEIPYPGIEFNEYAQPICLPSKDF--VYTPGRQCVVSGWGSM------GLR 163
Query: 391 SEILLWVHLRGITNE-QCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDED 215
L L I N C+ + + CA Y + SCQGDSGGP ED
Sbjct: 164 YAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYL-EGGIDSCQGDSGGPFACRRED 222
Query: 214 GQPTMVGVVSFGHRDGC-NSPHPSAYVRPGHYHDW 113
G + GV+S+G DGC P Y Y W
Sbjct: 223 GAFVLAGVISWG--DGCAQKKQPGIYTMVAPYLSW 255
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 51.6 bits (118), Expect = 6e-07
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Frame = -1
Query: 724 IIHHEWVLTAAHC---LANRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 554
+I W++TAAHC L R VR N R + E +IH Y +
Sbjct: 70 VIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSFSVKEA---YIHSGYNN---QTADN 123
Query: 553 DIALVKLNHHIPYSRYIQPCRLQNSEQKNIN-YEGAIFTVSGYGRTDDPWNGG----VAS 389
DIAL++++ + I+P L + + K + Y+ + V GYG T + G + S
Sbjct: 124 DIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGV--VIGYGLTLGEDSSGEPKLINS 180
Query: 388 EILLWVHLRGITNEQCLTHYP-----NSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIV 224
+ L + I+++ C+ + + ++ Q AY + TA GDSGGPL I
Sbjct: 181 QTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAP----GDSGGPLLIH 236
Query: 223 DEDGQPTMVGVVSFG--HRDGC--NSPHPSAYVRPGHYHDWFYEVTG 95
+G+ +G+ S+G DG P Y R Y W V G
Sbjct: 237 KSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVIG 283
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 280 NDTAQSSCQGDSGGPLTIVDED-GQPTMVGVVSFGHRDGCNSPHPSAYVRPGHYHDWFYE 104
N +A +C GDSGG L D++ G+ ++ + SFG R GC S + + R Y +
Sbjct: 228 NYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTR-GCPSNMLARFTRVDMYLNLICN 286
Query: 103 VTGI 92
TG+
Sbjct: 287 YTGV 290
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 253 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 161
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 253 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 161
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.55
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = -1
Query: 562 QTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNG--GVAS 389
Q +DI +++L I L + NI GA T G+G DP G A
Sbjct: 174 QGNDIVILELESTIDDVEGANYACLPFLPEVNIQ-SGANVTSFGWG--SDPGKGFDNAAF 230
Query: 388 EILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDED-G 212
++ + L T C ++ S I + C A D ++ C GDSGG LT D
Sbjct: 231 PMIQVLTLATETLATCEENWGTS--IPFDSFCTAEEED--KNVCSGDSGGGLTFHQSDSA 286
Query: 211 QPTMVGVVSFG 179
+ ++ +VS+G
Sbjct: 287 REFIIAIVSYG 297
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = -1
Query: 433 GYGRTDDPWNGGVASEILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQ 254
G GRTDD WN +++++ + +E +++ ++ V QK++ A+ N +Q+ C
Sbjct: 49 GQGRTDDAWNE------VVFLNDKKFKSELLVSN--SATVRQKRSDLPAHCNCLSQNQCP 100
Query: 253 GDSGGPLTIVDEDGQP 206
GP DG+P
Sbjct: 101 PGPPGPPGPAGMDGKP 116
>Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical
protein K10H10.10 protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 452 CNLHRERLRTYR*SMERWRGVRNPVVGASAWYHQRAVSDPLPEQP 318
C HRER R R++ V Y +R ++PLP +P
Sbjct: 214 CKKHRERFRYVCPDPLRFQSFAENAVDFCVRYQERCPNEPLPAEP 258
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -1
Query: 487 QNSEQKNINY--EGAIFTVSGYGRTDDPWNGGVAS---EILLWVHLRGITNEQCLTHYPN 323
Q+S + ++++ +G I VS Y +D N V EIL +++R I C H PN
Sbjct: 185 QHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN 244
Query: 322 SRVI 311
+ ++
Sbjct: 245 ANLL 248
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
protein R11A8.6 protein.
Length = 1141
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 642 FVKPKRTTKLMRLARQWAAVRTHSW 716
FVK KR +R AR WA R W
Sbjct: 440 FVKEKRFANWLRDARDWAVSRNRFW 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,175,168
Number of Sequences: 27780
Number of extensions: 390839
Number of successful extensions: 1100
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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