Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e11f
(714 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.81
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.81
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.81
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 1.9
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 23 1.9
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 23 1.9
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 4.3
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 5.7
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 5.7
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 5.7
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 9.9
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 125 HGPPISHRSRLACRRRSDPASDQPSYGQP-RRGSQLLRRF-NHSPRMGPDC 271
HGPPI H+ R + P + + P S +L+ + +P + P+C
Sbjct: 93 HGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTPNC 143
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 125 HGPPISHRSRLACRRRSDPASDQPSYGQP-RRGSQLLRRF-NHSPRMGPDC 271
HGPPI H+ R + P + + P S +L+ + +P + P+C
Sbjct: 93 HGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTPNC 143
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.81
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 125 HGPPISHRSRLACRRRSDPASDQPSYGQP-RRGSQLLRRF-NHSPRMGPDC 271
HGPPI H+ R + P + + P S +L+ + +P + P+C
Sbjct: 93 HGPPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTPNC 143
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 424 WLS*TITFHTHVTSSPADYKTVNRRTSTTK 513
W + T+ + T+SP T RRT+TT+
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTR 1064
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 535 PLTVKIAPS*LMFFCSLFCSLQGWM 461
PL +KIA + FCSL+ + G++
Sbjct: 241 PLLMKIASQFVGIFCSLYFCIFGYI 265
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 535 PLTVKIAPS*LMFFCSLFCSLQGWM 461
PL +KIA + FCSL+ + G++
Sbjct: 66 PLLMKIASQFVGIFCSLYFCIFGYI 90
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 128 GPPISHRSRLACRRRSDPASDQPSYGQPRRGSQLLRRFNHSP 253
GP HR LA +RR G RRG R H P
Sbjct: 301 GPLHDHRPALAQQRRVAAVQVPQLAGGGRRGPGPARSRRHLP 342
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 206 QPRRGSQLLRRFNHSP 253
+PR S L++ FN SP
Sbjct: 406 RPRNNSILIKNFNDSP 421
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 552 DPWNGGVASEILLWVHLRGITNEQC 626
+PW AS V + GI NE C
Sbjct: 523 NPWANCTASTRCWEVFMDGICNEDC 547
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 125 HGPPISHRSRLACRRRSDPASDQPSYGQPR 214
HGPPI H+ R + P + P PR
Sbjct: 93 HGPPIHHQIRPPILHDTQPMCN-PQLQVPR 121
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.0 bits (42), Expect = 9.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 464 PALQTTKQ*TEEHQLRRCNLHRERL 538
P L T +E R N HR+RL
Sbjct: 583 PQLDVTSFTIQEDVYTRLNTHRDRL 607
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,458
Number of Sequences: 336
Number of extensions: 3786
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -