Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e10r
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   6.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   6.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   6.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   6.2  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   8.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.2  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 279 N*KYKSHIYSYNSTRNTLYFNXIY 208
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 279 N*KYKSHIYSYNSTRNTLYFNXIY 208
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 279 N*KYKSHIYSYNSTRNTLYFNXIY 208
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 279 N*KYKSHIYSYNSTRNTLYFNXIY 208
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 255 YSYNSTRNTLYFNXIY 208
           Y+YN+    LY+N  Y
Sbjct: 98  YNYNNNCKKLYYNINY 113


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 159 PVRLTANMIAGHLLIXLLRRSXPXYIILHN 70
           PV++T  + +G ++  ++    P Y +  N
Sbjct: 507 PVKITIGIHSGEVVTGVIGHRMPRYCLFGN 536


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 159 PVRLTANMIAGHLLIXLLRRSXPXYIILHN 70
           PV++T  + +G ++  ++    P Y +  N
Sbjct: 507 PVKITIGIHSGEVVTGVIGHRMPRYCLFGN 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,192
Number of Sequences: 438
Number of extensions: 1559
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)