Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e08f
(722 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 26 0.36
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 26 0.36
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 26 0.36
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 25 0.62
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 23 2.5
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.5
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 7.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.6
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 7.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.6
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 25.8 bits (54), Expect = 0.36
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 236 TRRNQNNHQVITNGNVNSIRNSN 304
TR N NN TN N N NSN
Sbjct: 124 TRGNNNNTPSATNNNTNFNNNSN 146
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 25.8 bits (54), Expect = 0.36
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 236 TRRNQNNHQVITNGNVNSIRNSN 304
TR N NN TN N N NSN
Sbjct: 72 TRGNNNNTPSATNNNTNFNNNSN 94
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 25.8 bits (54), Expect = 0.36
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 236 TRRNQNNHQVITNGNVNSIRNSN 304
TR N NN TN N N NSN
Sbjct: 255 TRGNNNNTPSATNNNTNFNNNSN 277
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 25.0 bits (52), Expect = 0.62
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 200 SRNGAN-NQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 316
+ NG N N +W N N + + + RNS +GN
Sbjct: 378 NNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSRNSKNSGN 417
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 430 VHNNNVAVGDGQQGG 386
V+NN + GDG GG
Sbjct: 505 VYNNKIPTGDGALGG 519
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 2.5
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = -2
Query: 646 RIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSID 467
R ++G+ S + SS +++ + + + P+ ++ PD++ SD D
Sbjct: 803 RERSGSESSSISERCSSRVESLTPERKM-EPPGVPLNSTPRSTPDKREKSPTSDKAQEAD 861
Query: 466 GSVV 455
G VV
Sbjct: 862 GEVV 865
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 349 QQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
Q R+++ + D P AG+ CC L
Sbjct: 166 QNRRVKYKKEDLPAAAGKASNGNKCCCL 193
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 243 VTKTTIKLLQMAMSTLSGTRTTMET 317
V TT++LL + GT+ T+ET
Sbjct: 220 VALTTLQLLIYIQVIVIGTKNTIET 244
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 96 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 147
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -2
Query: 700 SSCVTVQGLVVTTPPGPSRIQTGNP-VGSATSLSSSVTDNVRAQAEANQVDS 548
SS +T V T+PPG T + + S S +SS + +A N S
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKS 191
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,483
Number of Sequences: 336
Number of extensions: 4825
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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