Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e03r
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019315-1|AAH19315.1| 359|Homo sapiens N-acetylneuraminic acid... 138 2e-32
BC000008-1|AAH00008.1| 359|Homo sapiens N-acetylneuraminic acid... 138 2e-32
AL137073-4|CAI13886.1| 359|Homo sapiens N-acetylneuraminic acid... 138 2e-32
AK001659-1|BAA91818.1| 359|Homo sapiens protein ( Homo sapiens ... 138 2e-32
AF257466-1|AAF75261.1| 359|Homo sapiens N-acetylneuraminic acid... 136 1e-31
AL137073-5|CAI13887.1| 140|Homo sapiens N-acetylneuraminic acid... 108 3e-23
AL137073-6|CAI13888.1| 115|Homo sapiens N-acetylneuraminic acid... 93 9e-19
AK057389-1|BAB71463.1| 669|Homo sapiens protein ( Homo sapiens ... 30 9.1
>BC019315-1|AAH19315.1| 359|Homo sapiens N-acetylneuraminic acid
synthase (sialic acid synthase) protein.
Length = 359
Score = 138 bits (334), Expect = 2e-32
Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 169 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 228
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCI 486
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++ E+ C
Sbjct: 229 ALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLLPCEMACN 288
Query: 485 DKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDVIYKTLVYDKKEDEPLNE 309
+KL KS+V +G IL + +KV EPKG + +++ K ++ +ED+ + E
Sbjct: 289 EKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTVEEDDTIME 347
>BC000008-1|AAH00008.1| 359|Homo sapiens N-acetylneuraminic acid
synthase (sialic acid synthase) protein.
Length = 359
Score = 138 bits (334), Expect = 2e-32
Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 169 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 228
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCI 486
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++ E+ C
Sbjct: 229 ALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLLPCEMACN 288
Query: 485 DKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDVIYKTLVYDKKEDEPLNE 309
+KL KS+V +G IL + +KV EPKG + +++ K ++ +ED+ + E
Sbjct: 289 EKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTVEEDDTIME 347
>AL137073-4|CAI13886.1| 359|Homo sapiens N-acetylneuraminic acid
synthase (sialic acid synthase) protein.
Length = 359
Score = 138 bits (334), Expect = 2e-32
Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 169 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 228
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCI 486
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++ E+ C
Sbjct: 229 ALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLLPCEMACN 288
Query: 485 DKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDVIYKTLVYDKKEDEPLNE 309
+KL KS+V +G IL + +KV EPKG + +++ K ++ +ED+ + E
Sbjct: 289 EKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTVEEDDTIME 347
>AK001659-1|BAA91818.1| 359|Homo sapiens protein ( Homo sapiens
cDNA FLJ10797 fis, clone NT2RP4000657, weakly similar to
SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE. ).
Length = 359
Score = 138 bits (334), Expect = 2e-32
Identities = 70/179 (39%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 169 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 228
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCI 486
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++ E+ C
Sbjct: 229 ALGTKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLLPCEMACN 288
Query: 485 DKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDVIYKTLVYDKKEDEPLNE 309
+KL KS+V +G IL + +KV EPKG + +++ K ++ +ED+ + E
Sbjct: 289 EKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKGYPPEDIFNLVGKKVLVTVEEDDTIME 347
>AF257466-1|AAF75261.1| 359|Homo sapiens N-acetylneuraminic acid
phosphate synthase protein.
Length = 359
Score = 136 bits (328), Expect = 1e-31
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 169 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 228
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCI 486
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++ E+ C
Sbjct: 229 ALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLLPCEMACN 288
Query: 485 DKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDVIYKTLVYDKKEDEPLNE 309
+KL KS+V +G IL + +KV EPK + +++ K ++ +ED+ + E
Sbjct: 289 EKLGKSVVAKVKIPEGTILTMDMLTVKVGEPKAYPPEDIFNLVGKKVLVTVEEDDTIME 347
>AL137073-5|CAI13887.1| 140|Homo sapiens N-acetylneuraminic acid
synthase (sialic acid synthase) protein.
Length = 140
Score = 108 bits (259), Expect = 3e-23
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Frame = -1
Query: 842 YDIISSDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXX 666
Y I+ + FC L C SAYP+ ED NL V+ +Y+ F D+P+GYSG E
Sbjct: 28 YQIVKPLNPNFCFLQCTSAYPLQPEDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAV 87
Query: 665 XXXXXXLEKHITLDKSMKGTDHVCSLTPSEFQQLVRDVRVIEASLGTPIKKVV 507
LE+HITLDK+ KG+DH SL P E +LVR VR++E +LG+P K+++
Sbjct: 88 ALGAKVLERHITLDKTWKGSDHSASLEPGELAELVRSVRLVERALGSPTKQLL 140
>AL137073-6|CAI13888.1| 115|Homo sapiens N-acetylneuraminic acid
synthase (sialic acid synthase) protein.
Length = 115
Score = 93.5 bits (222), Expect = 9e-19
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = -1
Query: 770 EDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXXXXXXXXLEKHITLDKSMKGTDHVC 594
ED NL V+ +Y+ F D+P+GYSG E LE+HITLDK+ KG+DH
Sbjct: 1 EDVNLRVISEYQKLFPDIPIGYSGHETGIAISVAAVALGAKVLERHITLDKTWKGSDHSA 60
Query: 593 SLTPSEFQQLVRDVRVIEASLGTPIKKVVTSEIPCIDKL 477
SL P E +LVR VR++E +LG+P K+++ E+ C +K+
Sbjct: 61 SLEPGELAELVRSVRLVERALGSPTKQLLPCEMACNEKV 99
>AK057389-1|BAB71463.1| 669|Homo sapiens protein ( Homo sapiens
cDNA FLJ32827 fis, clone TESTI2003109, weakly similar to
VACUOLAR PROTEIN 8. ).
Length = 669
Score = 30.3 bits (65), Expect = 9.1
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 260 LLCSNIRNNGFFNRNHLR*GVHLLSYRILEFCI*RLPSEARSGLLV 397
L SNI N+GF++ + G LLS + E C+ + PS+ R+ LL+
Sbjct: 562 LSSSNIINDGFYDYGRINPGTKLLSLK--ELCL-QEPSDLRAVLLI 604
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,556,813
Number of Sequences: 237096
Number of extensions: 2124407
Number of successful extensions: 4255
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4238
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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