Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e03r
         (842 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...   104   2e-22
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...   104   2e-22
K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    32   0.86 

>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score =  104 bits (249), Expect = 2e-22
 Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 24/195 (12%)
 Frame = -1

Query: 827 SDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXXXXXXX 651
           S  + + L+HC+S+YP   +DC+L ++   +  F +V +GYSG E               
Sbjct: 171 SGKEDYALMHCVSSYPTDPKDCSLQLISVLRTRFPNVAIGYSGHELGVIISQAAVLLGAR 230

Query: 650 XLEKHITLDKSMKGTDHVCSLTPSEF-------------------QQLVRDV---RVIEA 537
            +E+H TLDKS KG+DH CSL P E                    Q++V+ +     +EA
Sbjct: 231 IVERHFTLDKSQKGSDHRCSLEPQELKALTTAITNFKLSSVPMPPQEIVKKLNGDEELEA 290

Query: 536 SL-GTPIKKVVTSEIPCIDKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDV 360
           +L     K ++  E+PC +KL KS+V     NKG  L   D+ IKV+EP GL A    D+
Sbjct: 291 ALQHVESKTILPCELPCRNKLGKSIVAARNLNKGYRLQLADMAIKVSEPSGLTAEDFLDL 350

Query: 359 IYKTLVYDKKEDEPL 315
           + K L  +  EDEP+
Sbjct: 351 VGKELADNIGEDEPI 365


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score =  104 bits (249), Expect = 2e-22
 Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 24/195 (12%)
 Frame = -1

Query: 827 SDHKQFCLLHCISAYPVPFEDCNLTVLQDYKNTF-DVPVGYSGQEXXXXXXXXXXXXXXX 651
           S  + + L+HC+S+YP   +DC+L ++   +  F +V +GYSG E               
Sbjct: 171 SGKEDYALMHCVSSYPTDPKDCSLQLISVLRTRFPNVAIGYSGHELGVIISQAAVLLGAR 230

Query: 650 XLEKHITLDKSMKGTDHVCSLTPSEF-------------------QQLVRDV---RVIEA 537
            +E+H TLDKS KG+DH CSL P E                    Q++V+ +     +EA
Sbjct: 231 IVERHFTLDKSQKGSDHRCSLEPQELKALTTAITNFKLSSVPMPPQEIVKKLNGDEELEA 290

Query: 536 SL-GTPIKKVVTSEIPCIDKLQKSLVMGSTKNKGEILYPGDVKIKVAEPKGLNALHLEDV 360
           +L     K ++  E+PC +KL KS+V     NKG  L   D+ IKV+EP GL A    D+
Sbjct: 291 ALQHVESKTILPCELPCRNKLGKSIVAARNLNKGYRLQLADMAIKVSEPSGLTAEDFLDL 350

Query: 359 IYKTLVYDKKEDEPL 315
           + K L  +  EDEP+
Sbjct: 351 VGKELADNIGEDEPI 365


>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 8   MSIYLCIFRTCYLKF*LYIFLTYFFVTY-NIYYALFKSILL 127
           +SIYLCI+ +  L   L I+L+ +   Y +IY +L+ SI L
Sbjct: 39  LSIYLCIYLSISLSIYLSIYLSIYLSIYLSIYLSLYLSIYL 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,148,746
Number of Sequences: 53049
Number of extensions: 658088
Number of successful extensions: 1393
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)