Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e03f
         (777 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid...   210   4e-54
AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid...   210   4e-54
AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid...   210   4e-54
BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid...   209   1e-53
AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens ...   209   1e-53
AL137073-5|CAI13887.1|  140|Homo sapiens N-acetylneuraminic acid...    42   0.002

>BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  210 bits (513), Expect = 4e-54
 Identities = 98/187 (52%), Positives = 123/187 (65%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYREL RYA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQFCLL 727
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 728 HCISAYP 748
            C SAYP
Sbjct: 183 QCTSAYP 189


>AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  210 bits (513), Expect = 4e-54
 Identities = 98/187 (52%), Positives = 123/187 (65%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYREL RYA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQFCLL 727
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 728 HCISAYP 748
            C SAYP
Sbjct: 183 QCTSAYP 189


>AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid
           phosphate synthase protein.
          Length = 359

 Score =  210 bits (513), Expect = 4e-54
 Identities = 98/187 (52%), Positives = 123/187 (65%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYREL RYA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQFCLL 727
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 728 HCISAYP 748
            C SAYP
Sbjct: 183 QCTSAYP 189


>BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  209 bits (510), Expect = 1e-53
 Identities = 97/187 (51%), Positives = 123/187 (65%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFL 547
            +K L+RPY + +SWGKTYGEHK HLEFS  QYREL RYA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQFCLL 727
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 728 HCISAYP 748
            C SAYP
Sbjct: 183 QCTSAYP 189


>AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10797 fis, clone NT2RP4000657, weakly similar to
           SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE. ).
          Length = 359

 Score =  209 bits (510), Expect = 1e-53
 Identities = 97/187 (51%), Positives = 123/187 (65%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFL 547
            +K L+RPY + +SWGKTYGEHK HLEFS  QYREL RYA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQFCLL 727
             L VPF K+GSGD+NN  +L+  A K  P++IS+GM     +K +Y I+   +  FC L
Sbjct: 123 HELNVPFFKVGSGDTNNFPYLEKTAKKGRPMVISSGMQSMDTMKQVYQIVKPLNPNFCFL 182

Query: 728 HCISAYP 748
            C SAYP
Sbjct: 183 QCTSAYP 189


>AL137073-5|CAI13887.1|  140|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 140

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 635 PLIISTGMVDKTAVKTIYDIISSDHKQFCLLHCISAYP 748
           P++IS+GM     +K +Y I+   +  FC L C SAYP
Sbjct: 11  PMVISSGMQSMDTMKQVYQIVKPLNPNFCFLQCTSAYP 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,020,959
Number of Sequences: 237096
Number of extensions: 2193802
Number of successful extensions: 3728
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3728
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)