Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19e03f
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...   168   6e-42
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...   168   6e-42
AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p pro...    29   7.1  
AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA...    29   7.1  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   9.4  

>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score =  168 bits (409), Expect = 6e-42
 Identities = 84/171 (49%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
 Frame = +2

Query: 239 FIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKFTKKYLERPYDNPNSWGK 418
           +IIAE GQNHQG               G  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 419 TYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFLVNLKVPFIKIGSGDSNN 598
           TYGEHK +LEFS  QY +L  + +E+ + FTASAMD  S +FL  L VPFIKIGSGD+NN
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 599 LLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQ-FCLLHCISAYP 748
              LK AA+  +PL+ISTGM     V+ I   +    K+ + L+HC+S+YP
Sbjct: 136 FPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGKEDYALMHCVSSYP 186


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score =  168 bits (409), Expect = 6e-42
 Identities = 84/171 (49%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
 Frame = +2

Query: 239 FIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGEKFTKKYLERPYDNPNSWGK 418
           +IIAE GQNHQG               G  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 419 TYGEHKSHLEFSDTQYRELFRYAQEVGILFTASAMDMVSFDFLVNLKVPFIKIGSGDSNN 598
           TYGEHK +LEFS  QY +L  + +E+ + FTASAMD  S +FL  L VPFIKIGSGD+NN
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 599 LLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHKQ-FCLLHCISAYP 748
              LK AA+  +PL+ISTGM     V+ I   +    K+ + L+HC+S+YP
Sbjct: 136 FPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGKEDYALMHCVSSYP 186


>AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 464 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 360
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


>AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 464 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 360
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +1

Query: 328  LREVSKDMSRREIYKKISRKALRQPKLVGKDVRRTQKSFGILRYTIQRI 474
            L E +KD+S REI +  + KA +Q  + G +  R+ K  G L  T+  +
Sbjct: 918  LDESNKDVSIREIKRSFNLKAQKQDSIKGLET-RSIKGLGYLPVTMNAL 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,818,327
Number of Sequences: 53049
Number of extensions: 711315
Number of successful extensions: 1525
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)