Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19e01f
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 40 0.001
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 38 0.006
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 37 0.013
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 36 0.039
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 35 0.052
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 34 0.091
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 34 0.091
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 34 0.091
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 34 0.12
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.16
03_01_0249 - 1935355-1935827,1936129-1936330 32 0.37
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 32 0.49
02_05_0366 - 28313190-28313601,28313759-28314225,28315044-283157... 31 1.1
01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,836... 30 2.0
03_05_0468 - 24630701-24631399 28 6.0
01_06_0960 - 33376012-33376433,33376566-33376731,33376848-333770... 28 6.0
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 28 7.9
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 169 DNRISSENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 321
D R ++ P F PFGQ+PVL+ + +S AI RY+ KY GA+
Sbjct: 39 DLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 303
PE + PFG++PVLE QS AI RY+ RKY
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 37.1 bits (82), Expect = 0.013
Identities = 57/207 (27%), Positives = 79/207 (38%), Gaps = 23/207 (11%)
Frame = +1
Query: 106 PVKALGESQ-----RLLLAYG--GQEFE----DNRISSENWPEFKPKTPFGQMPVLEIDG 252
PVK G +Q R+LL G E+E D + PE + PFGQ+P + DG
Sbjct: 3 PVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQ-DG 61
Query: 253 KQYA-QSTAICRYLGRKYG------LAGANDEEAFEIDQNVEFLNDIRASAASVHYXXXX 411
Y +S AI +Y+ RKY L N EA +D E SA S
Sbjct: 62 DLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECI 121
Query: 412 XXXXXXXXXXXXXXYPFFFEKLNEILTKNNGHIALGKLTWGDFV-YAGM--YDYLKAMLQ 582
EKL ++L ++ GDFV +A + + Y +
Sbjct: 122 INPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG 181
Query: 583 KP--DLEQKYPAFRKPIEAVLAIPKVK 657
P L YP + E ++A P VK
Sbjct: 182 TPYASLFDSYPHVKAWWERLMARPSVK 208
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 321
PE + PFGQMP + +S A+ RY+ RKY + AN
Sbjct: 44 PEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEAN 85
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 35.1 bits (77), Expect = 0.052
Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 10/169 (5%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG---LAGANDEEAFEIDQNVEFLN 366
P + PFGQ+P E +S AI +Y+ RK+G L +N E+ +D +E +
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVES 103
Query: 367 DIRASAASVHYXXXXXXXXXXXXXXXXXXYPFFFEKLNEILTKNNGHIALGKLTWGDFV- 543
A S EKL + L ++ K GDF+
Sbjct: 104 SHFDGAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFIS 163
Query: 544 ------YAGMYDYLKAMLQKPDLEQKYPAFRKPIEAVLAIPKVKAYVDA 672
+ +Y YL A LE YP + I+ V+ P VK +A
Sbjct: 164 LADISHFPTVY-YLLASAHASVLE-AYPRVKAWIDDVMQRPSVKKVTEA 210
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 184 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNV 354
S PEF P G++PVLE +S AI RY+ R L G++ + I+Q +
Sbjct: 63 SNKTPEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWM 122
Query: 355 EF 360
+F
Sbjct: 123 DF 124
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 88 VKFYYFPVKALGESQRLLLAYGGQEFE----DNRISSENWPEFKPKTPFGQMPVLEIDGK 255
+K Y P+ + L G+++E D I+ PE + PFGQ+P L+
Sbjct: 3 MKVYGLPMSTNVARVLVCLEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDGDL 62
Query: 256 QYAQSTAICRYLGRK 300
+S AI +Y+ RK
Sbjct: 63 ILFESRAISKYVLRK 77
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 34.3 bits (75), Expect = 0.091
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 303
P+ + PFGQ+P + +S AICRY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 187 ENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 303
+N PE + PFG++P L+ +S AI +Y+ RKY
Sbjct: 41 QNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKY 79
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYA-QSTAICRYLGRK 300
P+ + PFGQ+P L+ DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 196 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAG 315
P F PFGQ+P + +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 184 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYL 291
S PEF P G++PVLE +S AI RY+
Sbjct: 39 SNKTPEFLKMNPIGKIPVLETPDGPVFESNAIARYV 74
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 184 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYL 291
S PE+ P G++P+LE +S AI RY+
Sbjct: 600 SNKTPEYLKMNPIGKVPILETPDGPVFESNAIARYV 635
>02_05_0366 - 28313190-28313601,28313759-28314225,28315044-28315782,
28316548-28316615,28316693-28316757,28316922-28320162,
28320239-28320301,28320756-28320824,28321020-28321055,
28322035-28322280,28322531-28322569,28322695-28322816,
28322921-28323004,28323100-28323235,28323486-28323535,
28323620-28323756,28323863-28323951,28324847-28324954,
28325080-28325163,28325841-28325888,28326036-28326153,
28328262-28328347
Length = 2168
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 471 ETQ*DTDEEQRSYRAWQVDLGRLCVRRHV 557
E + D D+E SY +W VD R+HV
Sbjct: 1572 EAEIDEDQEPLSYESWDVDFATTAYRQHV 1600
>01_01_1060 -
8363272-8365912,8366375-8366443,8366479-8366843,
8367403-8367550,8367630-8367873,8368105-8368407,
8368639-8368851,8368927-8369002,8369533-8369561,
8369610-8369984,8371784-8371927,8374053-8374086
Length = 1546
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 146 LTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSP 313
L R+S+++ HLK G S+L R RC + A + + A +A + A SP
Sbjct: 640 LHEGRASESLTTHLKAGGASDLTSFIGRVRCSPAVALALVVAAAAAAAATAKLYSP 695
>03_05_0468 - 24630701-24631399
Length = 232
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 109 VKALGESQRLLLAYGGQEFEDN--RISSENWPEFKPKTPFGQMPVLEIDGKQYAQSTAIC 282
V G R+ LA G +E+ +++++ GQ+PVL + GK +S I
Sbjct: 15 VSMYGNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKPVCESLVIL 74
Query: 283 RYLGRKYGLAG 315
++ ++ G
Sbjct: 75 EFIDEEFAGVG 85
>01_06_0960 -
33376012-33376433,33376566-33376731,33376848-33377033,
33377206-33377442
Length = 336
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 499 NGHIALGKLTWGDFVYAGMYDYLKAMLQKPDLEQKY-PAFRKPIEAVLAIPKVKAYVDAA 675
+G +G+ G F +Y+Y Q P L Y P RK V P K YVD
Sbjct: 196 SGSHTIGRAQCGSFARDRLYNYSGEGRQDPSLNTAYAPELRK--ACVAGDPFDKTYVDMD 253
Query: 676 P 678
P
Sbjct: 254 P 254
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 211 KTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG----LAGANDEEAFEIDQNVE 357
++PFG++P E +S AI RY+ R Y L N EE+ +D +E
Sbjct: 48 RSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWME 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,114,922
Number of Sequences: 37544
Number of extensions: 291234
Number of successful extensions: 1125
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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