Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d21r
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   3.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 82  FVHTLGLAVYYMRVNSA 32
           F   +GLA YY +VN A
Sbjct: 212 FTQDIGLAAYYAQVNLA 228


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 266 KKKQNNGNETTNFIKKFVLQFRTNL 340
           K+ Q NGN  TNF    + Q + ++
Sbjct: 154 KEYQMNGNNITNFKNSNIFQLKQHM 178


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +1

Query: 664  TGPICPEPTAEEN*FAASSWAGRCGASRTAFSGAEAVDTTSEADRTLPRSTLTA 825
            T P+ P+        + S W      SR A S   +  TT EA   +    LTA
Sbjct: 911  TNPLAPDAVDLTQLTSVSEWLASIKMSRYAESFERSGVTTLEAAARVTVQELTA 964


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 175  ILQFSSQYNAIN*QHSSLVS 234
            IL F+ QY  IN  H +LVS
Sbjct: 1529 ILYFTIQYRPINEFHWTLVS 1548


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 175  ILQFSSQYNAIN*QHSSLVS 234
            IL F+ QY  IN  H +LVS
Sbjct: 1525 ILYFTIQYRPINEFHWTLVS 1544


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,198
Number of Sequences: 438
Number of extensions: 3987
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)