Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d21f
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    26   1.2  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 210 YDVERSYGTSRQKEGALVCLPRRRFSHALLLERPN 314
           Y ++RS    + +EGALV L    F+ A +L   N
Sbjct: 869 YYIDRSLSEGKTEEGALVKLDDYDFAAAFILNETN 903


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +3

Query: 132 CTV-WQYVWSWGKFRRKQTHSRISCW 206
           CT+   +V  WG   R+QT +   CW
Sbjct: 451 CTIRMSFVKGWGAEYRRQTVTSTPCW 476


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,885
Number of Sequences: 2352
Number of extensions: 14841
Number of successful extensions: 85
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)