Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d21f
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D64154-1|BAA11023.1|  407|Homo sapiens Mr 110,000 antigen protein.    176   9e-44
BC017245-1|AAH17245.1|  407|Homo sapiens adhesion regulating mol...   176   9e-44
AL354836-4|CAC22308.1|  407|Homo sapiens adhesion regulating mol...   176   9e-44
BC010733-1|AAH10733.1|  296|Homo sapiens Unknown (protein for IM...    42   0.002
AF471294-1|AAQ05469.1|  118|Homo sapiens Ig heavy chain variable...    33   1.6  
AF471366-1|AAQ05541.1|  122|Homo sapiens Ig heavy chain variable...    30   8.7  

>D64154-1|BAA11023.1|  407|Homo sapiens Mr 110,000 antigen protein.
          Length = 407

 Score =  176 bits (428), Expect = 9e-44
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +1

Query: 178 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 357
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 358 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 516
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>BC017245-1|AAH17245.1|  407|Homo sapiens adhesion regulating
           molecule 1 protein.
          Length = 407

 Score =  176 bits (428), Expect = 9e-44
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +1

Query: 178 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 357
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 358 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 516
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>AL354836-4|CAC22308.1|  407|Homo sapiens adhesion regulating
           molecule 1 protein.
          Length = 407

 Score =  176 bits (428), Expect = 9e-44
 Identities = 74/113 (65%), Positives = 90/113 (79%)
 Frame = +1

Query: 178 NKHIVEFRAGRMTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDD 357
           NK++VEFRAG+M+LKG  V PDKRKGL+Y+ Q +DSL+HFCWKDRT+G VEDDL+IFPDD
Sbjct: 20  NKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDD 79

Query: 358 CEFTRVNECTTGRVYVXXXXXXXXXXXXWMQEPKADKDEEYCRRINEALNNPP 516
           CEF RV +C +GRVYV            WMQEPK D+DEE+CR++NE LNNPP
Sbjct: 80  CEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPP 132


>BC010733-1|AAH10733.1|  296|Homo sapiens Unknown (protein for
           IMAGE:3897044) protein.
          Length = 296

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 454 PKADKDEEYCRRINEALNNPP 516
           PK D+DEE+CR++NE LNNPP
Sbjct: 1   PKTDQDEEHCRKVNEYLNNPP 21


>AF471294-1|AAQ05469.1|  118|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 118

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
 Frame = +1

Query: 214 TLKGRM-VHPDKRKGLLYVY----QGEDSLMHFCWKDRTTGEV 327
           ++KGR  +  D  K  LY+     +GED+ +++C KDR TG++
Sbjct: 63  SMKGRFTISRDNSKNTLYLQMNSLRGEDTAVYYCAKDRATGDL 105


>AF471366-1|AAQ05541.1|  122|Homo sapiens Ig heavy chain variable
           region, VH3 family protein.
          Length = 122

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = +1

Query: 214 TLKGRM-VHPDKRKGLLYVYQG----EDSLMHFCWKDRTTGE 324
           ++KGR  +  D  KG LY+Y      +D+ +++C KDR  G+
Sbjct: 63  SVKGRFTISRDNSKGTLYLYLNSLVDDDTAVYYCAKDRLAGD 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,188,279
Number of Sequences: 237096
Number of extensions: 2097675
Number of successful extensions: 7711
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7710
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)