Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d20f
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.4  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   9.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.7  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 482 VQLPTITYTV*ASPQ*TDTPVGANTKTGKLPIQCFAL 592
           +QLPT+T      PQ T    G   +T     Q   L
Sbjct: 67  LQLPTVTEIQETQPQRTKPTAGKRARTAYTSAQLVEL 103


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 482 VQLPTITYTV*ASPQ*TDTPVGANTKTGKLPIQCFAL 592
           +QLPT+T      PQ T    G   +T     Q   L
Sbjct: 58  LQLPTVTEIQETQPQRTKPTAGKRARTAYTSAQLVEL 94


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 374  IAELRRTTEISLAIFVGSNE*WLLASNTF 288
            IAE+RR + +  A+ +G    W L  + F
Sbjct: 2640 IAEIRRKSRLVKALKLGGGMVWALDLDDF 2668


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -2

Query: 139 CPGRLQLEPNWG 104
           C  +L   PNWG
Sbjct: 17  CAAQLNFTPNWG 28


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 185 ISCLLPLVSLEPSTGPILVV 244
           ISC+   VS+  S GP LV+
Sbjct: 547 ISCVSRSVSMALSIGPPLVI 566


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 185 ISCLLPLVSLEPSTGPILVV 244
           ISC+   VS+  S GP LV+
Sbjct: 547 ISCVSRSVSMALSIGPPLVI 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,943
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)