Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19d18f
(451 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V668 Cluster: Protein transport protein SEC61 gamma-1... 102 3e-21
UniRef50_P60059 Cluster: Protein transport protein SEC61 subunit... 100 3e-20
UniRef50_Q19967 Cluster: Protein transport protein SEC61 subunit... 92 4e-18
UniRef50_Q7TQ10 Cluster: Aa1027; n=1; Rattus norvegicus|Rep: Aa1... 79 3e-14
UniRef50_Q6TXH8 Cluster: LRRGT00021; n=1; Rattus norvegicus|Rep:... 73 4e-12
UniRef50_A3FPQ8 Cluster: Sec61-gamma subunit of protein transloc... 65 6e-10
UniRef50_Q9C2D4 Cluster: Probable protein transport protein SEC6... 63 2e-09
UniRef50_Q4QPX3 Cluster: IP05558p; n=2; Drosophila melanogaster|... 61 1e-08
UniRef50_Q09827 Cluster: Probable protein transport protein SEC6... 56 4e-07
UniRef50_A0C442 Cluster: Chromosome undetermined scaffold_148, w... 54 1e-06
UniRef50_Q8BZY7 Cluster: 15 days embryo male testis cDNA, RIKEN ... 54 2e-06
UniRef50_P35179 Cluster: Protein transport protein SSS1; n=6; Sa... 50 2e-05
UniRef50_UPI0000499206 Cluster: protein translocase SEC61 comple... 49 4e-05
UniRef50_Q4Q9Z2 Cluster: Protein transport protein sec61 gamma s... 48 7e-05
UniRef50_A2XI76 Cluster: Putative uncharacterized protein; n=2; ... 46 4e-04
UniRef50_Q00VG1 Cluster: Chromosome 15 contig 1, DNA sequence; n... 44 0.002
UniRef50_A2DJB4 Cluster: Protein translocase gamma subunit, puta... 42 0.005
UniRef50_Q4WWS5 Cluster: Protein translocation complex subunit S... 40 0.019
UniRef50_Q8SRW9 Cluster: Probable protein transport protein SEC6... 38 0.076
UniRef50_Q8I895 Cluster: Protein phosphatase 2C; n=2; Plasmodium... 33 2.9
>UniRef50_Q9V668 Cluster: Protein transport protein SEC61 gamma-1
subunit; n=9; Eukaryota|Rep: Protein transport protein
SEC61 gamma-1 subunit - Drosophila melanogaster (Fruit
fly)
Length = 68
Score = 102 bits (245), Expect = 3e-21
Identities = 49/68 (72%), Positives = 53/68 (77%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 275
MD++ KF EPG+ FAKDSIRLV+RCTKPDRKEFQKIAIATA VKLIHIP
Sbjct: 1 MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIHIP 60
Query: 276 INNIIVGS 299
INNIIVGS
Sbjct: 61 INNIIVGS 68
>UniRef50_P60059 Cluster: Protein transport protein SEC61 subunit
gamma; n=16; Chordata|Rep: Protein transport protein
SEC61 subunit gamma - Homo sapiens (Human)
Length = 68
Score = 99.5 bits (237), Expect = 3e-20
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 275
MDQ+ +FVEP +QF KDSIRLV+RCTKPDRKEFQKIA+ATA VKLIHIP
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 276 INNIIVG 296
INNIIVG
Sbjct: 61 INNIIVG 67
>UniRef50_Q19967 Cluster: Protein transport protein SEC61 subunit
gamma; n=30; Eukaryota|Rep: Protein transport protein
SEC61 subunit gamma - Caenorhabditis elegans
Length = 68
Score = 92.3 bits (219), Expect = 4e-18
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 275
MDQ +EP +QF+KDS RLV+RCTKPDRKE+QKIA+ATA VKLIHIP
Sbjct: 1 MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGFAIMGFIGFFVKLIHIP 60
Query: 276 INNIIVGS 299
INNIIVG+
Sbjct: 61 INNIIVGA 68
>UniRef50_Q7TQ10 Cluster: Aa1027; n=1; Rattus norvegicus|Rep: Aa1027
- Rattus norvegicus (Rat)
Length = 135
Score = 79.4 bits (187), Expect = 3e-14
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3
Query: 111 KFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNII 290
+ VEP +QF KDSI+LV+RCT+P RKEFQKIA+ATA VKLIHIPINNII
Sbjct: 2 QLVEPSRQFVKDSIQLVKRCTEPARKEFQKIAMATAIGFAIMGFIGFFVKLIHIPINNII 61
>UniRef50_Q6TXH8 Cluster: LRRGT00021; n=1; Rattus norvegicus|Rep:
LRRGT00021 - Rattus norvegicus (Rat)
Length = 233
Score = 72.5 bits (170), Expect = 4e-12
Identities = 37/60 (61%), Positives = 41/60 (68%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 275
MDQ+ +FVEP +QF KDSIRLV+R TKPDRKEFQKIA ATA VKLI P
Sbjct: 173 MDQVMQFVEPSRQFVKDSIRLVKRRTKPDRKEFQKIARATAIGFAIMGFIGFFVKLIPHP 232
>UniRef50_A3FPQ8 Cluster: Sec61-gamma subunit of protein
translocation complex, putative; n=10; Apicomplexa|Rep:
Sec61-gamma subunit of protein translocation complex,
putative - Cryptosporidium parvum Iowa II
Length = 87
Score = 65.3 bits (152), Expect = 6e-10
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +3
Query: 120 EPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIVG 296
+ ++FA DSIRLVRRCTKPD KEF+ +A A VKL+ IPINNII+G
Sbjct: 25 QSAQEFALDSIRLVRRCTKPDAKEFRNVAYACTVGFFLMGFIGYSVKLVFIPINNIIMG 83
>UniRef50_Q9C2D4 Cluster: Probable protein transport protein SEC61
subunit gamma; n=11; Dikarya|Rep: Probable protein
transport protein SEC61 subunit gamma - Neurospora
crassa
Length = 70
Score = 63.3 bits (147), Expect = 2e-09
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +3
Query: 99 DQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPI 278
DQI + ++ ++F KD I+ +++C KPDR+EF KI+ A VKLIHIP+
Sbjct: 3 DQIQEILDVPREFLKDGIQFIKKCQKPDRREFIKISQAVGTGFLIMGAVGYLVKLIHIPL 62
Query: 279 NNIIVG 296
N ++VG
Sbjct: 63 NQVLVG 68
>UniRef50_Q4QPX3 Cluster: IP05558p; n=2; Drosophila
melanogaster|Rep: IP05558p - Drosophila melanogaster
(Fruit fly)
Length = 124
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/57 (49%), Positives = 36/57 (63%)
Frame = +3
Query: 123 PGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIV 293
P K F K+S+R +RCTKPDR+EFQ+I+I VKL+HIPI NII+
Sbjct: 67 PSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMHIPIVNIIM 123
>UniRef50_Q09827 Cluster: Probable protein transport protein SEC61
subunit gamma; n=9; Dikarya|Rep: Probable protein
transport protein SEC61 subunit gamma -
Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 56.0 bits (129), Expect = 4e-07
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3
Query: 129 KQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIVG 296
K F K+ ++RC KPDRKEF I+ A A +KLIHIPIN ++VG
Sbjct: 13 KNFYKEGSHFIKRCVKPDRKEFLSISKAVATGFVLMGLIGYIIKLIHIPINKVLVG 68
>UniRef50_A0C442 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=6;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_148, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 74
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3
Query: 135 FAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIVGS 299
F ++S R +R+CTKPD++E+ KIA + A +KL+ IPINNII+ +
Sbjct: 19 FGQESYRFIRKCTKPDKREYIKIATSCAIGFAVMGAVGYFIKLVFIPINNIILSA 73
>UniRef50_Q8BZY7 Cluster: 15 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:8030453L09
product:PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT
homolog; n=1; Mus musculus|Rep: 15 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:8030453L09 product:PROTEIN TRANSPORT PROTEIN SEC61
GAMMA SUBUNIT homolog - Mus musculus (Mouse)
Length = 60
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRK 188
MDQ+ +F+EPG QF KDSI+LV+RCTKPD++
Sbjct: 1 MDQVMQFLEPGWQFVKDSIQLVKRCTKPDKR 31
Score = 42.7 bits (96), Expect = 0.004
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 185 ERIPKDCHCNSHRILHHGLHWILCKADSYPH 277
+RIP+ CH S+RI +H +HW+L + D YP+
Sbjct: 30 KRIPEACHGYSYRICYHEIHWLLRETDPYPY 60
>UniRef50_P35179 Cluster: Protein transport protein SSS1; n=6;
Saccharomycetaceae|Rep: Protein transport protein SSS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 80
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +3
Query: 99 DQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPI 278
+Q+ K VE +F ++ + + +C KPD KE+ KI A +KLIHIPI
Sbjct: 16 NQVEKLVEAPVEFVREGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPI 75
Query: 279 NNIIV 293
+IV
Sbjct: 76 RYVIV 80
>UniRef50_UPI0000499206 Cluster: protein translocase SEC61 complex
gamma subunit; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
protein translocase SEC61 complex gamma subunit -
Entamoeba histolytica HM-1:IMSS
Length = 70
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 96 MDQIAKFV-EPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHI 272
MD + ++V EP ++F DS R + +C KP++KE+ K +KL+HI
Sbjct: 1 MDTLEQYVLEPTEEFILDSKRFITKCNKPNQKEYNKTIYVVLIGFAILGFCGYFIKLVHI 60
Query: 273 PINNIIVGS 299
PI +++ S
Sbjct: 61 PITGLLMSS 69
>UniRef50_Q4Q9Z2 Cluster: Protein transport protein sec61 gamma
subunit, putative; n=5; Trypanosomatidae|Rep: Protein
transport protein sec61 gamma subunit, putative -
Leishmania major
Length = 69
Score = 48.4 bits (110), Expect = 7e-05
Identities = 24/55 (43%), Positives = 31/55 (56%)
Frame = +3
Query: 135 FAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIVGS 299
F K+S LVR+C KP+ EF AIA VKL+ IPINN+I+G+
Sbjct: 15 FTKNSRMLVRKCQKPNYNEFTTAAIAALIGFFMMGFLGFFVKLVFIPINNVILGA 69
>UniRef50_A2XI76 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 118
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKI 203
MD + V+ ++FAKDSI LV+ C KPDRKEF K+
Sbjct: 72 MDAVDSVVDSLREFAKDSICLVKHCHKPDRKEFTKV 107
>UniRef50_Q00VG1 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 381
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -1
Query: 301 YEPTIMLLMGI*ISFTXXXXXXXXXXXMAVAMAIFWNSFLSGFVHLLTNLMESLANCLPG 122
YE +MLL+G+ +SFT +AV AI NS SG VH T+L SLAN L G
Sbjct: 49 YELKMMLLIGMKMSFTKKPTNPMITNPVAVRRAIIQNSRASGLVHRFTSLALSLANSLTG 108
>UniRef50_A2DJB4 Cluster: Protein translocase gamma subunit,
putative; n=1; Trichomonas vaginalis G3|Rep: Protein
translocase gamma subunit, putative - Trichomonas
vaginalis G3
Length = 71
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 96 MDQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIP 275
M+ + P F K +++++RCT P K + A A+A K+I P
Sbjct: 1 MEALDIVAAPATNFVKSCVKVLKRCTLPSTKVLKDSASASAVGFLILGSVGFIFKVIAYP 60
Query: 276 INNIIVG 296
INN+I+G
Sbjct: 61 INNVIIG 67
>UniRef50_Q4WWS5 Cluster: Protein translocation complex subunit
Sss1, putative; n=3; Trichocomaceae|Rep: Protein
translocation complex subunit Sss1, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 88
Score = 40.3 bits (90), Expect = 0.019
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 18/84 (21%)
Frame = +3
Query: 99 DQIAKFVEPGKQFAKDSIRLVRRCTKPDRKEFQKIAIATA---XXXXXXXXXXXXVK--- 260
D I + + + F +D + VRRCTKPD++EF KI+ A +K
Sbjct: 3 DTIQELADIPRDFLRDGMLFVRRCTKPDKREFIKISQAVGMGFIIMVSSSSIGYFIKVLG 62
Query: 261 ------------LIHIPINNIIVG 296
++HIP+NNI+VG
Sbjct: 63 SMRRPFLIVLFTIVHIPVNNILVG 86
>UniRef50_Q8SRW9 Cluster: Probable protein transport protein SEC61
subunit gamma; n=1; Encephalitozoon cuniculi|Rep:
Probable protein transport protein SEC61 subunit gamma -
Encephalitozoon cuniculi
Length = 72
Score = 38.3 bits (85), Expect = 0.076
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 147 SIRLV-RRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIHIPINNIIVGS 299
SIRL ++C +P KE A +KLIHIPINNIIV S
Sbjct: 17 SIRLFSKKCVRPSGKELSMSIKRHAIGIGFLGILGYAIKLIHIPINNIIVSS 68
>UniRef50_Q8I895 Cluster: Protein phosphatase 2C; n=2; Plasmodium
falciparum 3D7|Rep: Protein phosphatase 2C - Plasmodium
falciparum (isolate 3D7)
Length = 906
Score = 33.1 bits (72), Expect = 2.9
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -3
Query: 290 NYVINGDMNQLYKE-SNEAHDAKSDGCCNGNLLEF 189
+Y+ N ++N++YK N+ +D K DGCC +L+++
Sbjct: 375 SYITN-EINRVYKNVDNKENDKKDDGCCGPSLVKY 408
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 399,655,131
Number of Sequences: 1657284
Number of extensions: 6833924
Number of successful extensions: 11716
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11710
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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