Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d16f
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    56   4e-10
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               25   1.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 56.0 bits (129), Expect = 4e-10
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 8/186 (4%)
 Frame = +3

Query: 195 ARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRNSQGRXXX 374
           +RIVGG+  G+   P +A +  T   G   +CGA+++S    +TAAHC    N+      
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIIDENTTKLAIV 216

Query: 375 XXXXXXXXXXXXXRI---NTNNVQMHGSYNM----DTIHNDVAMI-IHGRVGYTNVIQPI 530
                             + N V +H  Y++    D   ND+A++     + + + + P 
Sbjct: 217 VGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPA 276

Query: 531 FLPPSHLLNNQFVGTWAWAAGYGLTRDGGGSNTQKHQVALRVITNAVCSRTFNGIIASTL 710
            LP  H L++ F G+     G+G T   G  +    +  L ++T   C + +  I+ + +
Sbjct: 277 CLPFQHFLDS-FAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYYGNIMVNAM 335

Query: 711 CVDTQG 728
           C   +G
Sbjct: 336 CAYAKG 341


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 672 CSRTFNGIIASTLCVDTQGGAQHLPR 749
           C  T +GI+     VD Q   +HLPR
Sbjct: 61  CFMTKHGILDKNAEVDVQKALRHLPR 86


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 521 PADLPAPLTSPQQPVRG 571
           P   P+P  SPQ P RG
Sbjct: 21  PGPQPSPHQSPQAPQRG 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,323
Number of Sequences: 438
Number of extensions: 3711
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)