Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d12r
         (326 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M83077-1|AAA58390.1|  288|Homo sapiens antigen B7 protein.             29   2.5  
M27533-1|AAA36045.1|  288|Homo sapiens protein ( Human Ig rearra...    29   2.5  
EF064750-1|ABK41933.1|  288|Homo sapiens CD80 molecule protein.        29   2.5  
BC042665-1|AAH42665.1|  288|Homo sapiens CD80 molecule protein.        29   2.5  
AY197778-1|AAO39209.1|  162|Homo sapiens costimulatory factor CD...    29   2.5  
AY197777-1|AAO39208.1|  256|Homo sapiens costimulatory factor CD...    29   2.5  
AY081815-1|AAL89819.1|  148|Homo sapiens costimulatory molecule ...    29   2.5  

>M83077-1|AAA58390.1|  288|Homo sapiens antigen B7 protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>M27533-1|AAA36045.1|  288|Homo sapiens protein ( Human Ig
           rearranged B7 protein mRNA VC1-region, complete cds. ).
          Length = 288

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>EF064750-1|ABK41933.1|  288|Homo sapiens CD80 molecule protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>BC042665-1|AAH42665.1|  288|Homo sapiens CD80 molecule protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>AY197778-1|AAO39209.1|  162|Homo sapiens costimulatory factor CD80
           type 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>AY197777-1|AAO39208.1|  256|Homo sapiens costimulatory factor CD80
           type 1 protein.
          Length = 256

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


>AY081815-1|AAL89819.1|  148|Homo sapiens costimulatory molecule
           variant IgV-CD80 protein.
          Length = 148

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 166 HHAKRLKQIT*TRSC*HHYLIE*MTEKTHRCQKRSKTVMTMKVMSGKTN 20
           H  K +K++  T SC H+  +E + +     QK  K V+TM  MSG  N
Sbjct: 37  HVTKEVKEVA-TLSCGHNVSVEELAQTRIYWQKEKKMVLTM--MSGDMN 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,025,046
Number of Sequences: 237096
Number of extensions: 542323
Number of successful extensions: 1348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)