Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d11f
         (683 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0115 + 27783170-27783331,27783510-27783705,27783825-27784411     33   0.16 
01_01_1014 - 8022787-8023935                                           28   7.9  

>05_07_0115 + 27783170-27783331,27783510-27783705,27783825-27784411
          Length = 314

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = +3

Query: 204 WCDSYLADCRLEVYSTQQ-----YAHQGHPSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 368
           WC+S+ +D R  V S+        A  G  + AS +V V+ CP CG R R E   +++  
Sbjct: 3   WCNSF-SDVRTAVDSSLSPAAAVAAAAGKKAAASLAVLVKMCPSCGHRARYEQETTTIQD 61

Query: 369 L 371
           L
Sbjct: 62  L 62


>01_01_1014 - 8022787-8023935
          Length = 382

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 198 HPWCDSYLADCRLEVYSTQQYAHQGHPSPASGSVTV 305
           HP+   Y  +  L  YS   Y  +  P+PASG+ T+
Sbjct: 139 HPFAILYPGNVGLLCYSISFYVAELQPAPASGTATL 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,426,080
Number of Sequences: 37544
Number of extensions: 336341
Number of successful extensions: 750
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)