Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d11f
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.1  
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    23   6.8  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   6.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   9.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +3

Query: 207 CDSYLADCRLEVYSTQQYAHQGHPSPASGSVTVRDCPRCGGRCRL 341
           CD Y  DC++E        H       S S  V DC R G   RL
Sbjct: 747 CDFYACDCKMECPKQCTCYHD-----QSWSSNVVDCSRAGYDDRL 786


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 263 ASGPSESGKWERHSSRLSALWGAVSAGTPSLFGS 364
           + GP ++ +++   +  S + G VS GTP + GS
Sbjct: 42  SGGPLQTLRYDLLGNIFSFIVGVVSFGTPCVEGS 75


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 257 LLGAVYLKSTICEVAVTP 204
           +L A   K T+CEVAV P
Sbjct: 275 VLQAAAAKMTVCEVAVEP 292


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 312 CPRCGGRCRLEHRH 353
           CP C GRC  E +H
Sbjct: 674 CPTCAGRCN-EFKH 686


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,940
Number of Sequences: 2352
Number of extensions: 12372
Number of successful extensions: 59
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)