Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d10r
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical ...    29   2.7  
U13072-2|AAK31397.2|  380|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>Z82056-1|CAB04854.1|  325|Caenorhabditis elegans Hypothetical
           protein T26H5.3 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +1

Query: 385 SDSQPFFCCGTYLTISKF-------GGTQKKMIKIIYLLHIA*IVYQKILIYLF*YTK*T 543
           S+S P   CGT+LT++ +        G  KK +++ + L +A I+     ++LF      
Sbjct: 196 SESVPSIQCGTFLTLNIYNLIFARPSGISKKTVQMQHRLVVALIIQTSFTLFLFVVPVNV 255

Query: 544 KIYYIFF 564
            I +++F
Sbjct: 256 LIAFVYF 262


>AL132858-1|CAB60474.1|  325|Caenorhabditis elegans Hypothetical
           protein Y113G7A.1 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
 Frame = +1

Query: 376 VYASDSQPFFCCGTY-------LTISKFGGTQKKMIKIIYLLHIA*IVYQKILIYLF*YT 534
           ++ S+  P   CGT+       LTI++  G  KK I++ +LL  A I+   +  +LF   
Sbjct: 193 IFISEILPIVQCGTFVSLNLYNLTIARPSGMSKKTIQMQHLLIFALILQASVNTFLFIVP 252

Query: 535 K*TKIYYIF 561
               IY ++
Sbjct: 253 VNAVIYIVY 261


>U13072-2|AAK31397.2|  380|Caenorhabditis elegans Hypothetical
           protein C07D10.5 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 344 VKLSVSPFCIPLDIPTDIVSQFEGL 270
           +K+S+ PFC P  +  D+++Q+  +
Sbjct: 178 IKISIKPFCSPQFLAKDVINQYASI 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,567,111
Number of Sequences: 27780
Number of extensions: 337555
Number of successful extensions: 692
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)