Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19d10f
(759 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 86 3e-17
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 83 2e-16
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 52 4e-07
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 45 7e-05
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 38 0.006
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 36 0.031
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 36 0.031
Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical pr... 35 0.055
U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore co... 35 0.055
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 35 0.055
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 33 0.17
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 33 0.17
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 31 0.67
AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical ... 31 0.89
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 31 0.89
Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92827-7|CAB07324.1| 368|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical pr... 29 4.7
U64835-2|AAO25998.1| 337|Caenorhabditis elegans Serpentine rece... 28 6.3
U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical p... 28 8.3
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/111 (32%), Positives = 69/111 (62%)
Frame = +1
Query: 370 HLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQM 549
H++KA LGTG+L++P AFK +GL G++ TV++ ++C +C +V AH + + + +
Sbjct: 57 HMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLI 116
Query: 550 SFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNI 702
+A + A++ GP +++ F+ + +++FI+ G C VY V +A N+
Sbjct: 117 DYANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFISQLGFCCVYFVFMADNL 167
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Frame = +1
Query: 319 FTERKLDTPTSNMD-TLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSY 495
F R D+ + D L H++K +GTG+L++P AFK +G+ G++ + ++C +C+
Sbjct: 29 FASRVRDSRSITADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTR 88
Query: 496 ILVKCAHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSV 675
L+ H + ++ +M +A V +A++ GP +R F+ + I++F+ FG C V
Sbjct: 89 QLIFGQHYITFIKREQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINMFVAQFGFCCV 148
Query: 676 YTVIIARNILQ 708
Y V +A N+ Q
Sbjct: 149 YFVFMADNLKQ 159
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 79.8 bits (188), Expect = 2e-15
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Frame = +1
Query: 250 KNKEKIVSKYNMTKDAESGDFD-PFTERKLDTPTSNMDTLTHLLKASLGTGILAMPKAFK 426
+++ ++VSK++ ++A F ERK S+ L +L+K LG G ++P AFK
Sbjct: 45 QSEYQLVSKWDEAEEALGPQRKMSFIERK--EKISSKFALINLMKGMLGAGCFSVPLAFK 102
Query: 427 AAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGEAALDNGPQPLRK 606
+G ++G++ V++ +C C LVKCA L K + + + + A P+RK
Sbjct: 103 QSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLDYGNMAYKATQASYTPIRK 162
Query: 607 WANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDI 735
A R + SL I G C + + + ++ ++++F D+
Sbjct: 163 LAPVSRALVNSSLCILQLGICCCFYIFVVYHLHELLEFVMNDV 205
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/129 (27%), Positives = 65/129 (50%)
Frame = +1
Query: 349 SNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYK 528
S+ L +L+K LG G ++P AFK +G ++G++ V++ +C C LVKCA L K
Sbjct: 22 SSKFALINLMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSK 81
Query: 529 KTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQ 708
+ + + + A P+RK A R + SL I G C + + + ++ +
Sbjct: 82 VNQSAPLDYGNMAYKATQASYTPIRKLAPVSRALVNSSLCILQLGICCCFYIFVVYHLHE 141
Query: 709 IIQFYCGDI 735
+++F D+
Sbjct: 142 LLEFVMNDV 150
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/128 (25%), Positives = 58/128 (45%)
Frame = +1
Query: 340 TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV 519
T S L + + +G G ++ +FK AGL G+ IV + + + +V C+
Sbjct: 61 TGISATSGLINFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQY 120
Query: 520 LYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARN 699
L K + + E+ EAA+ N + RK +I I L G +V+ V +
Sbjct: 121 LAKSNGDQSLDYGEMAEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAVEH 180
Query: 700 ILQIIQFY 723
+++I +F+
Sbjct: 181 VIEIWEFF 188
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/130 (21%), Positives = 59/130 (45%)
Frame = +1
Query: 340 TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHV 519
T S L + + +G G ++ +FK AGL G I+ + + + +V C+
Sbjct: 33 TGISATSGLINFVCGMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQF 92
Query: 520 LYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARN 699
L +K ++ + E+ ++A++N +K+ ++ + L G +V + +
Sbjct: 93 LSEKKGDQKLDYGEMAKSAMENSYGWAKKYGKIAKVVVNTCLLAFQLGVITVSMIFAVEH 152
Query: 700 ILQIIQFYCG 729
I++I QF G
Sbjct: 153 IIEIWQFIAG 162
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 492
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 120 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 179
Query: 493 YILVK 507
YI+++
Sbjct: 180 YIVIE 184
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 492
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 154 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 213
Query: 493 YILVK 507
YI+++
Sbjct: 214 YIVIE 218
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 PFTERK-LDTPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCS 492
PF E K + ++ T+ + +GT +LAMP A + AGL+ GI+ + +A +C + +
Sbjct: 152 PFEELKDVSGKQGSIVTIFSIWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTA 211
Query: 493 YILVK 507
YI+++
Sbjct: 212 YIVIE 216
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 44.8 bits (101), Expect = 7e-05
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +1
Query: 361 TLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKK 540
T ++ + G G++A+P A + G + G ++ AVVCT+ +L + +L
Sbjct: 16 TALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLAENWTIL------ 69
Query: 541 TQMSFAEVGEAALDNGP-QPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQ 717
Q + E + P LR F F+ L +T FGT V+ ++ A+N ++
Sbjct: 70 -QELYPEYRDHCRKPYPAMGLRAIGPKFAHFVSAMLQVTQFGTAVVFVLLAAKNGENMLH 128
Query: 718 FYCGDIINERFLII 759
G ++ ++I+
Sbjct: 129 ANFGTHVSFCYMIL 142
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 388 LGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVK 507
+G G++AMP AFK +GL GIL + VAV + Y+L K
Sbjct: 58 VGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGK 97
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.031
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Frame = +1
Query: 373 LLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMS 552
++ + G G++A+ A + GLI G++ + CS + A L K Q
Sbjct: 33 IIGETAGGGMIALSYALTSMGLIPGLILLSL-------CSIFSLYTALELCWTWKIMQNR 85
Query: 553 FAEVGE-AALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCG 729
+ E + G R R FI + IT G +V ++ A+N+ ++ F+
Sbjct: 86 WPEYRDHCRKPYGEMAYRTIGRKMRSFIAFMICITQIGFATVLVLLAAKNLSILLHFFFS 145
Query: 730 DIINERFLII 759
IN+ +LI+
Sbjct: 146 LDINQCYLIL 155
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = +1
Query: 391 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKK----TQMSFA 558
G GI+A+P A A G++ VI+ V T+ +Y+L ++L + + +
Sbjct: 70 GGGIVALPTAIIQAEFWTGLIVCVILIGVVTYTAYVLGLSWNILLSTWPEYRHHCRKPYP 129
Query: 559 EVGEAALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQIIQFYCGDII 738
E+G A+ ++ + I + +T F VY ++ ++NI+ +I + G I
Sbjct: 130 EIGGRAM----------GKTCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHI 179
Query: 739 NERFLII 759
+ LI+
Sbjct: 180 SFCILIL 186
>Z73423-1|CAA97776.2| 492|Caenorhabditis elegans Hypothetical
protein C03A3.2 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.055
Identities = 29/128 (22%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Frame = +1
Query: 364 LTHLLKASLGTGILAMPKAFKAAG-LINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKK 540
L ++ +GTG LA+PKAF+ AG L++ L T + ++++ + +KK
Sbjct: 19 LLYVFNLIVGTGALALPKAFQTAGWLLSITLLTFSAFMSYVAATFVIEALSVANAVLSKK 78
Query: 541 TQMSFAEV----GEAALDNGPQ-PLRKWANAF--RIFIVISLF---ITYFGTCSVYTVII 690
++ + +V G + + + + + A+ F ++ +V S F I FG ++Y+ +
Sbjct: 79 RRVEYDDVVVADGPSTFEISKKVEVSEMASMFLSKVSLVFSYFAIIIYLFGDLAIYSTTV 138
Query: 691 ARNILQII 714
++ + I+
Sbjct: 139 PKSAMNIV 146
>U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform b protein.
Length = 889
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +1
Query: 139 NLRFTGKSIDQRCKMVNEPNGAIPAPQELETFISPDEKNKE-KIVSKYNMTKDAESGDFD 315
+L +GKS+ R ++ N I Q ET +S DE+ + +++ Y +K++ES D
Sbjct: 364 DLAVSGKSVGMRVHILKVSNDQIQHLQMFETSMSVDERLVDLELIQNYFPSKESES--LD 421
Query: 316 PFTERKLDTP-TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFT 459
+ +L P T+ + +L+ L K+S +M + A G +FT
Sbjct: 422 ETQDGELYNPLTAALFSLSALFKSSSAKKTYSMKRISFAIQWKKGRVFT 470
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform a protein.
Length = 1562
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +1
Query: 139 NLRFTGKSIDQRCKMVNEPNGAIPAPQELETFISPDEKNKE-KIVSKYNMTKDAESGDFD 315
+L +GKS+ R ++ N I Q ET +S DE+ + +++ Y +K++ES D
Sbjct: 364 DLAVSGKSVGMRVHILKVSNDQIQHLQMFETSMSVDERLVDLELIQNYFPSKESES--LD 421
Query: 316 PFTERKLDTP-TSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFT 459
+ +L P T+ + +L+ L K+S +M + A G +FT
Sbjct: 422 ETQDGELYNPLTAALFSLSALFKSSSAKKTYSMKRISFAIQWKKGRVFT 470
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.17
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Frame = +1
Query: 139 NLRFTGKSIDQRCKMVNEPNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDP 318
N S+D + +NE PQ E+ +P ++ + + + +++ + D +
Sbjct: 14 NKHVFSNSLDYWNQELNEVPSYQNQPQTGESGSNPPPHDRLEPIQESVVSEQPQKDDINK 73
Query: 319 FTERKLD------TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVC 480
E K D P S + ++ A G I+ +P A K G + I V VA VC
Sbjct: 74 QEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGWWS-IGAMVGVAYVC 132
Query: 481 THCSYILVKCAHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYF 660
+L++C LY+ K + ++ E+ D KW A ++ ++S
Sbjct: 133 YWTGVLLIEC---LYENGVKKRKTYREIA----DFYKPGFGKWVLAAQLTELLS------ 179
Query: 661 GTCSVYTVIIARNILQ 708
TC +Y +++A ++LQ
Sbjct: 180 -TCIIY-LVLAADLLQ 193
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.17
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Frame = +1
Query: 139 NLRFTGKSIDQRCKMVNEPNGAIPAPQELETFISPDEKNKEKIVSKYNMTKDAESGDFDP 318
N S+D + +NE PQ E+ +P ++ + + + +++ + D +
Sbjct: 14 NKHVFSNSLDYWNQELNEVPSYQNQPQTGESGSNPPPHDRLEPIQESVVSEQPQKDDINK 73
Query: 319 FTERKLD------TPTSNMDTLTHLLKASLGTGILAMPKAFKAAGLINGILFTVIVAVVC 480
E K D P S + ++ A G I+ +P A K G + I V VA VC
Sbjct: 74 QEEAKDDGHGEASEPISALQAAWNVTNAIQGMFIVGLPIAVKVGGWWS-IGAMVGVAYVC 132
Query: 481 THCSYILVKCAHVLYKKTKKTQMSFAEVGEAALDNGPQPLRKWANAFRIFIVISLFITYF 660
+L++C LY+ K + ++ E+ D KW A ++ ++S
Sbjct: 133 YWTGVLLIEC---LYENGVKKRKTYREIA----DFYKPGFGKWVLAAQLTELLS------ 179
Query: 661 GTCSVYTVIIARNILQ 708
TC +Y +++A ++LQ
Sbjct: 180 -TCIIY-LVLAADLLQ 193
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/108 (17%), Positives = 53/108 (49%)
Frame = +1
Query: 391 GTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLYKKTKKTQMSFAEVGE 570
G+G++A+P A ++ G + G + +++ ++ + + +L + + KT+ ++ S
Sbjct: 20 GSGLVALPSAMQSLGFMGGTITLIVMCLITYYTATLLGN--NWIIMKTRWSEYS-EHCRN 76
Query: 571 AALDNGPQPLRKWANAFRIFIVISLFITYFGTCSVYTVIIARNILQII 714
+ + L W F + T FG +V++++ A+ + +++
Sbjct: 77 PYPEMAHKALGTWMGMTTNFCT---YFTVFGGTAVFSLLAAKTLAEVL 121
>AF125971-3|AAN73292.1| 152|Caenorhabditis elegans Hypothetical
protein Y4C6B.4b protein.
Length = 152
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 598 LRKWANAFRIFIVISLFITYFGTCSVYTVI 687
+R W N FRI IV+ F+ CS Y +I
Sbjct: 2 IRIWGNYFRIIIVLLSFMCLVSVCSNYIII 31
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 598 LRKWANAFRIFIVISLFITYFGTCSVYTVI 687
+R W N FRI IV+ F+ CS Y +I
Sbjct: 2 IRIWGNYFRIIIVLLSFMCLVSVCSNYIII 31
>Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical
protein C29F7.5 protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 160 SIDQRCKMVNEPNGAIPAPQELETFI----SPDEKNKEKIVSKYNMTKDAESGDFDPFTE 327
S+ + CK N PN P+ ++ET++ P N I+ ++ + E +P E
Sbjct: 646 SVQKTCKECNLPNWCTPSVGDVETYVFGRQVPMPVNTPVILQQFETVAEQEGIRNNPLEE 705
Query: 328 RK 333
RK
Sbjct: 706 RK 707
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 235 ISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTH 372
++PD+ + + +++ N T ++ GD P T + T T++ D L +
Sbjct: 103 LNPDDGDGKSLLTDRNSTTSSDGGDPKPVTAKDPSTTTTDQDGLAN 148
>Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical
protein B0564.4 protein.
Length = 523
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 237 YKCFQLLWRWNGAIWFVHHFATLI 166
+K F LL+RW G+IW + T+I
Sbjct: 15 WKFFVLLFRWKGSIWKAIYMETII 38
>Z92827-7|CAB07324.1| 368|Caenorhabditis elegans Hypothetical
protein C29F7.4 protein.
Length = 368
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 160 SIDQRCKMVNEPNGAIPAPQELETFI----SPDEKNKEKIVSKYNMTKDAESGDFDPFTE 327
S+ + CK N PN P+ ++ET++ P N I+ ++ + E +P E
Sbjct: 292 SVQKTCKECNLPNWCTPSVGDVETYVFGRQVPMPVNTPVILQQFETVAEQEGIRNNPLEE 351
Query: 328 RKLDTPTSNMDTLTHL 375
+K ++ L L
Sbjct: 352 QKTTKDPRDISVLEAL 367
>Z49132-8|CAA88987.1| 366|Caenorhabditis elegans Hypothetical
protein ZK666.8 protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 235 ISPDEKNKEKIVSKYNMTKDAESGDFDPFTERKLDTPTSNMDTLTHLLKAS-LGTGILAM 411
+S +E KE VSK + KD + + R L +PT + L + T ++ +
Sbjct: 1 MSKEESTKESSVSKRTVRKDQIVKPNNEKSARSLKSPTKQFSVVPRLKRPDPTSTPLMPI 60
Query: 412 PKAFKAAGLINGIL 453
+ F+ I GI+
Sbjct: 61 DEKFRKRWHIEGII 74
>U64835-2|AAO25998.1| 337|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 29 protein.
Length = 337
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 376 LKASLGTGILAMPKAFKAAGLINGILFTVIVAVVCTHCSYILVKCAHVLY 525
L ++ + I+ K K G + + F++ +A + T C +ILV + Y
Sbjct: 211 LMFTIYSSIVTSSKLRKLGGHMKKVEFSMSIATIFTSCGFILVVALQICY 260
>U21308-12|AAB93315.2| 360|Caenorhabditis elegans Hypothetical
protein ZK1290.9 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 366 NTLIE-GFPGYWNLSHAQSLQGSRIDQWNTLHGYRGRRLHSLLVY 497
NT I GF G ++++Q G ++DQW + GY+ L+S V+
Sbjct: 124 NTCISIGF-GQGTITYSQVDNGCQVDQWKSSSGYKKIILNSFDVH 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,106,717
Number of Sequences: 27780
Number of extensions: 398756
Number of successful extensions: 1191
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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