Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19d08r
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 314 7e-86
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 126 2e-29
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 116 2e-26
Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 3.4
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 28 7.9
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical protein
ZK669.4 protein.
Length = 448
Score = 314 bits (770), Expect = 7e-86
Identities = 159/289 (55%), Positives = 204/289 (70%), Gaps = 1/289 (0%)
Frame = -2
Query: 894 LSAVKATGRNGRVLKEDMLSHLN-INSDDSNEVVLPGSVRAVEIPVTKAQARVELALEDK 718
L+ V+ TG++GRVLKED+L L + +D ++ + P +K+ ++ ED
Sbjct: 162 LAEVRGTGKDGRVLKEDVLKFLGQVPADHTSGSTNIRTTHQAPQPSSKSYEPLK---EDV 218
Query: 717 VVPVTGFQRAMVKSMTEAMKIPHFVFSDEYNVTKLVESRAALKKQAEERGVRLTYMPIII 538
VP+ G+ RAMVK+MTEA+KIPHF ++DE NV LV+ RA LK+ A+ER ++L+YMP I
Sbjct: 219 AVPIRGYTRAMVKTMTEALKIPHFGYNDEINVDSLVKYRAELKEFAKERHIKLSYMPFFI 278
Query: 537 KAASLSLSYLPILNSSLDSSCENLIYKASHNIGVAMDTPNGLVVPVIKNIQIKSILEIAQ 358
KAASL+L P LNS+ D EN+I+KASHNI +AMDTP GLVVP IKN + +SI EIAQ
Sbjct: 279 KAASLALLEYPSLNSTTDEKMENVIHKASHNICLAMDTPGGLVVPNIKNCEQRSIFEIAQ 338
Query: 357 ELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGGTYTKPVIFPPQVAIGALGKIQVLPRF 178
ELN L E G K Q+ DL GTF++SNIG +GGTY PV+FPPQVAIGA+GKI+ LPRF
Sbjct: 339 ELNRLLEAGKKQQIKREDLIDGTFSLSNIGNIGGTYASPVVFPPQVAIGAIGKIEKLPRF 398
Query: 177 DSQGNVVKAHILSVSWSADHRVIDGVTMARFSNHLKNYLEDPYILLLDL 31
D NV+ +I+ VSW ADHRV+DG TMARFSN K YLE P +L L
Sbjct: 399 DKHDNVIPVNIMKVSWCADHRVVDGATMARFSNRWKFYLEHPSAMLAQL 447
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 126 bits (304), Expect = 2e-29
Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 2/204 (0%)
Frame = -2
Query: 636 DEYNVTKLVESRAALKKQ-AEERGVRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 460
+E +++ L+E R +K + GV+L M ++AA+ +L P++N+ LD + ++Y
Sbjct: 264 NEIDMSSLIEMRKTYQKDFVAKHGVKLGMMSPFVRAAAYALQESPVVNAVLDEN--EIVY 321
Query: 459 KASHNIGVAMDTPNGLVVPVIKNIQIKSILEIAQELNTLQEKGSKGQLGLNDLTGGTFTI 280
+ +I VA+ TP GLVVPV++N++ + +I EL L K G+L + D+ GGTFTI
Sbjct: 322 RHFVDISVAVATPKGLVVPVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTFTI 381
Query: 279 SNIGIVGGTYTKPVIFPPQVAIGALGKIQVLPR-FDSQGNVVKAHILSVSWSADHRVIDG 103
SN G+ G + P+I PPQ AI LG V R G I+ ++ + DHR+IDG
Sbjct: 382 SNGGVFGSMFGTPIINPPQSAI--LGMHGVFDRVVPVNGKPEIRPIMQIALTYDHRLIDG 439
Query: 102 VTMARFSNHLKNYLEDPYILLLDL 31
F +K +EDP I+ ++L
Sbjct: 440 REAVTFLKKIKTAVEDPRIMFMNL 463
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 116 bits (279), Expect = 2e-26
Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 7/233 (3%)
Frame = -2
Query: 714 VPVTGFQRAMVKSMTEAMK-IPHFVFSDEYNVTKLVESRAALK----KQAEERGVRLTYM 550
+P++ ++ + K +TE+ IPH+ + E + L++ R L K + +++
Sbjct: 278 IPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKLNGLLAKGTSGQATKISIN 337
Query: 549 PIIIKAASLSLSYLPILNSSLDSSCENLIYKASH-NIGVAMDTPNGLVVPVIKNIQIKSI 373
IIKA++L+ +P NS ++ I + H ++ VA+ TP GL+ P+I N K +
Sbjct: 338 DFIIKASALACQRVPEANSYW---MDSFIRENHHVDVSVAVSTPAGLITPIIFNAHAKGL 394
Query: 372 LEIAQELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGGTYT-KPVIFPPQVAIGALGKI 196
IA E+ L ++ +G+L ++ GGTFT+SN+G+ G +I PPQ I A+G
Sbjct: 395 ATIASEIVELAQRAREGKLQPHEFQGGTFTVSNLGMFGSVSDFTAIINPPQSCILAIGGA 454
Query: 195 QVLPRFDSQGNVVKAHILSVSWSADHRVIDGVTMARFSNHLKNYLEDPYILLL 37
D K + V+ S DHR +DG A + H K +LE P+ +LL
Sbjct: 455 SDKLVPDEAEGYKKIKTMKVTLSCDHRTVDGAVGAVWLRHFKEFLEKPHTMLL 507
>Z81044-2|CAB02813.1| 337|Caenorhabditis elegans Hypothetical
protein C30H6.7 protein.
Length = 337
Score = 91.5 bits (217), Expect = 7e-19
Identities = 66/230 (28%), Positives = 112/230 (48%), Gaps = 3/230 (1%)
Frame = -2
Query: 714 VPVTGFQRAMVKSMTEA-MKIPHFVFSDEYN-VTKLVESRAALKKQAEERGVRLTYMPII 541
+P++ + + K +T + +IPH EY V ++ AL+++ ++ G ++ I
Sbjct: 103 IPLSNIRATIAKRLTASKQQIPH-----EYQGVDVRIDDILALRQKLKKSGTAVSLNDFI 157
Query: 540 IKAASLSLSYLPILNSSLDSSCENLIYKASHNIGVAMDTPNGLVVPVIKNIQIKSILEIA 361
IKAA+L+L +P +N L S +I VA+ TP GL+ P+++N I +L I+
Sbjct: 158 IKAAALALRSVPTVNVRWTPEGIGL---GSVDISVAVATPTGLITPIVENSDILGVLAIS 214
Query: 360 QELNTLQEKGSKGQLGLNDLTGGTFTISNIGIVGG-TYTKPVIFPPQVAIGALGKIQVLP 184
++ L + +L GG+FTISN+G+ G T +I PPQ AI +G +
Sbjct: 215 SKVKELSGLARESKLKPQQFQGGSFTISNLGMFGSVTNFTAIINPPQCAILTIGGTR-SE 273
Query: 183 RFDSQGNVVKAHILSVSWSADHRVIDGVTMARFSNHLKNYLEDPYILLLD 34
G + ++ V+ D R I RF H L DP +L+ +
Sbjct: 274 VVSVDGQLETQKLMGVNLCFDGRAISEECAKRFLLHFSESLSDPELLIAE 323
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -2
Query: 813 DSNEVVLPGSVRAVEIPVTKAQARVELALEDKVVPVTGFQRAMVKSMTEAMKIPHFVFSD 634
D N+ VL + E P T+ + V +EDK FQ+ + ++ + ++ D
Sbjct: 1320 DINDNVLAAILEPDEEPKTEEENDVVTEIEDKARDFGEFQKPTLLTICQEVEAYFSEHHD 1379
Query: 633 EYNVTKLVESRAALK--KQAEERGVRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 460
EY V +V+ K K+ + + II + S Y+ + ++ + S E Y
Sbjct: 1380 EY-VGSVVDDMELRKIFKETYGGSIPEDHKQIIEEVCSFQPGYIHVFDALIGSKLE-FTY 1437
Query: 459 KASHNIGVAMDTPN 418
NI ++ N
Sbjct: 1438 TIMSNIDRKIEKEN 1451
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.5 bits (63), Expect = 3.4
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -2
Query: 813 DSNEVVLPGSVRAVEIPVTKAQARVELALEDKVVPVTGFQRAMVKSMTEAMKIPHFVFSD 634
D N+ VL + E P T+ + V +EDK FQ+ + ++ + ++ D
Sbjct: 1320 DINDNVLAAILEPDEEPKTEEENDVVTEIEDKARDFGEFQKPTLLTICQEVEAYFSEHHD 1379
Query: 633 EYNVTKLVESRAALK--KQAEERGVRLTYMPIIIKAASLSLSYLPILNSSLDSSCENLIY 460
EY V +V+ K K+ + + II + S Y+ + ++ + S E Y
Sbjct: 1380 EY-VGSVVDDMELRKIFKETYGGSIPEDHKQIIEEVCSFQPGYIHVFDALIGSKLE-FTY 1437
Query: 459 KASHNIGVAMDTPN 418
NI ++ N
Sbjct: 1438 TIMSNIDRKIEKEN 1451
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -3
Query: 647 LYSVTSTTSQNWLNRVQHSKSKRKNVGLD*LTCRSSSKRHL*V*AIY 507
LY +T N +N + K+ GLD + ++ KRHL + I+
Sbjct: 294 LYEITGQDPSNGINNMAREKAAAVMKGLDCYSTYTNRKRHLRIEGIF 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,157,645
Number of Sequences: 27780
Number of extensions: 437039
Number of successful extensions: 1169
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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