Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d08f
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.3  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 241 TSHAVNKIVAFKLSDIGEGIR 303
           T HA+  +++FK SD+ + +R
Sbjct: 69  TYHAIFDLISFKDSDLQQKLR 89


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 241 TSHAVNKIVAFKLSDIGEGIR 303
           T HA+  +++FK SD+ + +R
Sbjct: 69  TYHAIFDLISFKDSDLQQKLR 89


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 419 PSYRLVMVTAALSLCTSQMLSN 354
           P Y  V  T  LS CT   L N
Sbjct: 241 PIYPAVTATVQLSTCTRTTLKN 262


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 639 YFKLSGDSSHRRSS*YFNFLVLFRFRSVY 553
           YF  +G  +  +++ Y NF++LF + SV+
Sbjct: 306 YFGKTGRKTVLKTNKYCNFIILF-YLSVF 333


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 580 GFVPFSERLFQQQAYQAQRLW 518
           GFVP  +R      +  ++LW
Sbjct: 446 GFVPLEQRCNAGLVFDEEKLW 466


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 71   LRT--RILNNYKEHDASPVFGRDHN 3
            LRT  R+L  Y + D   + GRD++
Sbjct: 2182 LRTINRVLRGYAKPDPKCILGRDND 2206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,910
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)