Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19d05r
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   4.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.1  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   8.1  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   8.1  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -3

Query: 642 FPLQ-GILGSKISWRTQNLAF 583
           F LQ GILG  +S +TQNL +
Sbjct: 244 FSLQDGILGMALSHKTQNLYY 264


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 50  NSNRNIFFFTNQDAPYRYELQSDNKINDDQLDNSE 154
           +SN ++ F  N++     E Q+ N+ N D LDN E
Sbjct: 152 SSNSDVLFKQNKE-----EEQTINRKNSDYLDNQE 181


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 152 HCCPIDHH*FYYHFVIHNDMEHPG 81
           H   +DH  + Y   +H++   PG
Sbjct: 509 HLKRLDHQPYQYKIAVHSEQNVPG 532


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 676 LYLYNVRQMEIGTNKIPTI 732
           L LYN+  +E+  NK+ T+
Sbjct: 380 LPLYNLHTLELSDNKLRTV 398


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 808 SCTH*FHTKHCSSEEWPDMWLV 743
           +C   ++   C  E  PD+W V
Sbjct: 122 NCNKIYNLAKCVQESAPDVWFV 143


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 808 SCTH*FHTKHCSSEEWPDMWLV 743
           +C   ++   C  E  PD+W V
Sbjct: 122 NCNKIYNLAKCVQESAPDVWFV 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,655
Number of Sequences: 438
Number of extensions: 4544
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)