Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19d05f
(753 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 27 0.16
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 0.28
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 25 0.65
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 25 0.65
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 24 1.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 8.0
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 27.1 bits (57), Expect = 0.16
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 168 GFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVPVNEKK 305
GF + ++ + P SP K+S P PPP L+ VNE+K
Sbjct: 199 GFRENGKSSAKRKQLVSEHPDSPNSKKSATPS-PPPQLE--VNERK 241
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 162 NNGFDMSSENPPTDRDPSLNRPGSPKPKRSTKPDLPP 272
N D+S + D S+++P + KP+ KP + P
Sbjct: 239 NGPLDLSVSSRKRSNDDSVSQPPNRKPRTDFKPQVLP 275
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 25.0 bits (52), Expect = 0.65
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 192 PPTDRDPSLNRPGSPKPKRSTKPDLPPPALKVP 290
PP + D N P + + +LPP A+ VP
Sbjct: 216 PPPEEDDDSNIPQNNPKNKQHNFNLPPGAIPVP 248
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 25.0 bits (52), Expect = 0.65
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 609 YILSYYVVIVGLCLYYLSMSF 671
++L Y V+I+ LC+YY +F
Sbjct: 225 HLLFYCVLIILLCIYYFYYAF 245
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 603 CGYILSYYVVIVGLCLYYLSMSF 671
C Y YY I+ LC+YY +F
Sbjct: 99 CTYYF-YYAFIILLCVYYFYYAF 120
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 621 YYVVIVGLCLYYLSMSF 671
Y +I+ LC+YY +F
Sbjct: 289 YCALIILLCIYYFCRAF 305
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 582 GYAQALGCGYILSYYVVIVGLCLYYLSMSFQ--STLPW 689
G+ +GC ++ + ++ C Y S+S + STL W
Sbjct: 535 GFIIIIGC--LIQFNTIVFAFCYCYYSISIRPISTLGW 570
Score = 22.2 bits (45), Expect = 4.6
Identities = 6/21 (28%), Positives = 14/21 (66%)
Frame = +3
Query: 603 CGYILSYYVVIVGLCLYYLSM 665
C +I+ +Y+ + + +YY S+
Sbjct: 322 CNFIILFYLSVFVILVYYASL 342
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 588 AQALGCGYILSYYVVIVGLCL 650
AQ L GY L VIVG L
Sbjct: 973 AQILSTGYALIMMAVIVGTAL 993
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 588 AQALGCGYILSYYVVIVGLCL 650
AQ L GY L VIVG L
Sbjct: 973 AQILSTGYALIMMAVIVGTAL 993
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 588 AQALGCGYILSYYVVIVGLCL 650
AQ L GY L VIVG L
Sbjct: 973 AQILSTGYALIMMAVIVGTAL 993
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 588 AQALGCGYILSYYVVIVGLCL 650
AQ L GY L VIVG L
Sbjct: 973 AQILSTGYALIMMAVIVGTAL 993
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +3
Query: 258 PDLPPPALKVPVNEKKAFEDIEGAPERMMWSNQI 359
P PP +++V N++ + P R W+ I
Sbjct: 995 PGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDI 1028
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,208
Number of Sequences: 336
Number of extensions: 5182
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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