Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19c23r
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X84753-1|CAA59234.1| 701|Homo sapiens luteinising hormone-chori... 33 0.94
S57793-1|AAB19917.2| 699|Homo sapiens luteinizing hormone recep... 33 0.94
M73746-1|AAA70231.1| 685|Homo sapiens lutropin/choriogonadotrop... 33 0.94
M63108-1|AAA59515.1| 699|Homo sapiens luteinizing hormone-chori... 33 0.94
AC073082-1|AAY15065.1| 472|Homo sapiens unknown protein. 33 0.94
BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing ... 31 2.9
AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210... 31 2.9
AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210... 31 2.9
AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein. 31 2.9
>X84753-1|CAA59234.1| 701|Homo sapiens luteinising
hormone-choriogonadotropin receptor protein.
Length = 701
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 155 IFWTFTCKYTKFLFFCLHKKFVLPIFLINNSRIYYEASLVFFFGPVNYCGN 3
IF FTC FF + F +P+ + NS++ L+ F P+N C N
Sbjct: 577 IFTDFTCM-APISFFAISAAFKVPLITVTNSKV-----LLVLFYPINSCAN 621
>S57793-1|AAB19917.2| 699|Homo sapiens luteinizing hormone receptor
protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 155 IFWTFTCKYTKFLFFCLHKKFVLPIFLINNSRIYYEASLVFFFGPVNYCGN 3
IF FTC FF + F +P+ + NS++ L+ F P+N C N
Sbjct: 575 IFTDFTCM-APISFFAISAAFKVPLITVTNSKV-----LLVLFYPINSCAN 619
>M73746-1|AAA70231.1| 685|Homo sapiens lutropin/choriogonadotropin
receptor protein.
Length = 685
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 155 IFWTFTCKYTKFLFFCLHKKFVLPIFLINNSRIYYEASLVFFFGPVNYCGN 3
IF FTC FF + F +P+ + NS++ L+ F P+N C N
Sbjct: 560 IFTDFTCM-APISFFAISAAFKVPLITVTNSKV-----LLVLFYPINSCAN 604
>M63108-1|AAA59515.1| 699|Homo sapiens luteinizing
hormone-choriogonadrotropin receptor protein.
Length = 699
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 155 IFWTFTCKYTKFLFFCLHKKFVLPIFLINNSRIYYEASLVFFFGPVNYCGN 3
IF FTC FF + F +P+ + NS++ L+ F P+N C N
Sbjct: 575 IFTDFTCM-APISFFAISAAFKVPLITVTNSKV-----LLVLFYPINSCAN 619
>AC073082-1|AAY15065.1| 472|Homo sapiens unknown protein.
Length = 472
Score = 32.7 bits (71), Expect = 0.94
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 155 IFWTFTCKYTKFLFFCLHKKFVLPIFLINNSRIYYEASLVFFFGPVNYCGN 3
IF FTC FF + F +P+ + NS++ L+ F P+N C N
Sbjct: 348 IFTDFTCM-APISFFAISAAFKVPLITVTNSKV-----LLVLFYPINSCAN 392
>BC151244-1|AAI51245.1| 1039|Homo sapiens FERM domain containing 4A
protein.
Length = 1039
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKA 385
H+ +
Sbjct: 753 HSSS 756
>AL365495-1|CAI13296.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKA 385
H+ +
Sbjct: 753 HSSS 756
>AL157392-5|CAI13127.1| 1039|Homo sapiens novel protein (FLJ10210)
protein.
Length = 1039
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 694 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 752
Query: 374 HNKA 385
H+ +
Sbjct: 753 HSSS 756
>AB037715-1|BAA92532.1| 1051|Homo sapiens KIAA1294 protein protein.
Length = 1051
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 197 SSRRVHKLKIHXXXXXXXXXXXXPCELCRSSDADSPDASTGRRRESHVENPPVNCSS-TA 373
S R+H L +H L +D SPD T R R S+ +P +CSS T+
Sbjct: 706 SPTRLHSLALHFRHRSSSLESQGKL-LGSENDTGSPDFYTPRTRSSNGSDPMDDCSSCTS 764
Query: 374 HNKA 385
H+ +
Sbjct: 765 HSSS 768
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,691,916
Number of Sequences: 237096
Number of extensions: 1433572
Number of successful extensions: 2908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2908
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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