Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19c22r
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 65 5e-11
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 45 7e-05
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 38 0.008
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 34 0.13
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-rela... 28 6.5
AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell death-re... 28 6.5
Z35663-9|CAA84730.1| 219|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical ... 28 8.6
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 65.3 bits (152), Expect = 5e-11
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Frame = -3
Query: 769 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC-----TATRVTI 605
AR+V G+E G FP+ +LR N + CGA+I+ +TAAHC + +
Sbjct: 25 ARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 604 VIRAGTVNMT-RPAVVFETTDYLNHPLYDESIQQIVQPHDIGXIKFG-RSLVFNDYVQPI 431
V+ N T +F +PLY + + HDI ++ + FN+Y QPI
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPI 137
Query: 430 RLQSSYHKDYNY-DGYRLTATGWGRTWTNGTAPENMNWVFLRGVTNAFCSEIFVINNIVQ 254
L S KD+ Y G + +GWG E + + + C I + +
Sbjct: 138 CLPS---KDFVYTPGRQCVVSGWGSMGLR--YAERLQAALIPIINRFDCVNSSQIYSSMS 192
Query: 253 DSTXCASGYNVTSQSTCQGDSGG 185
S CA GY +CQGDSGG
Sbjct: 193 RSAFCA-GYLEGGIDSCQGDSGG 214
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 44.8 bits (101), Expect = 7e-05
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Frame = -3
Query: 766 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR---VTIVIR 596
R++ G E+ +P+ ++++++ G + CG ++I ++ LTAAHC A + +R
Sbjct: 57 RLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVR 113
Query: 595 AGTVNMTRPAVVFETTDYLNHPLYDESIQQIVQPHDIGXIKFGRSLVFNDYVQPIRLQSS 416
G + + T HP Y+ +D ++ + + +PI L S
Sbjct: 114 VGG-HRSGSGSPHRVTAVSIHPWYNIGFPS---SYDFAIMRIHPPVNTSTTARPICLPSL 169
Query: 415 YHKDYNYDGYRLTATGWGRTWTNGT-APENMNWVFLRGVTNAFCSEI-FVINNIVQDSTX 242
+ TGWG T + + + + + ++ FCS + I I S
Sbjct: 170 PAVENRL----CVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 241 CASGYNVTSQSTCQGDSGGGL 179
CA GY+ +CQGDSGG L
Sbjct: 226 CA-GYSYGKIDSCQGDSGGPL 245
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 37.9 bits (84), Expect = 0.008
Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 4/150 (2%)
Frame = -3
Query: 493 HDIGXIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWT-NGTAPENMNWV 317
HD ++ + + F++ V+PI L + Y L GWGR + +G +
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLP----RPNMYYTKSLAVPGWGRIFNESGPLIHEIPMR 198
Query: 316 FLRGVTNAFCSEIFVINNIVQDSTXCASGYNVTSQS---TCQGDSGGGLTXXXXXXXXXX 146
R + + D CA+ NV++ S TC GDSGGGL
Sbjct: 199 IDRDCKRPWSDRL----PADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAF 254
Query: 145 XGISSFVSSTGCHTDYPAGFIRPGHYHELV 56
+ + GC ++ A F R Y L+
Sbjct: 255 LIAITSFGTRGCPSNMLARFTRVDMYLNLI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -3
Query: 766 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCT---ATRVTIVIR 596
RI+ G ++G + L G CGAT+I W +TAAHC TR + +R
Sbjct: 37 RIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVR 95
Query: 595 AGTVNMTRPAVVFE 554
N R V E
Sbjct: 96 EPKNNRERSFSVKE 109
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 763 IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTAT----RVTIVIR 596
I++G+ A S+ P+G N CG +I +T+AHC + VT +
Sbjct: 17 IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHCVFSGDDFAVTAKVT 76
Query: 595 AGTVNMTR 572
G V++ +
Sbjct: 77 LGDVHLNK 84
>U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-related
nuclease protein4 protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 559 FETT-DYLNHPLYDESIQQIVQPHDIGXIKFGRSLVFNDYVQPI 431
FETT D N E IQ + +D+ K + FN YV+P+
Sbjct: 16 FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59
>AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell
death-related nuclease 4 protein.
Length = 298
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 559 FETT-DYLNHPLYDESIQQIVQPHDIGXIKFGRSLVFNDYVQPI 431
FETT D N E IQ + +D+ K + FN YV+P+
Sbjct: 16 FETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV 59
>Z35663-9|CAA84730.1| 219|Caenorhabditis elegans Hypothetical
protein T04A8.11 protein.
Length = 219
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 751 WEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTA 635
++AE+G+ Y+ + RM+ G V +IH +GL A
Sbjct: 32 YDAEKGEKKYKSTKRMIEARG-VEEVHTELIHEQYGLAA 69
>Z35598-7|CAA84650.2| 325|Caenorhabditis elegans Hypothetical
protein F10F2.3 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 415 YHKDYNYDGYRLTATGWGRTWTNGT 341
Y + NY L AT WG TW +G+
Sbjct: 97 YFLEQNYTEAELYATTWGDTWGSGS 121
>AC006656-3|AAF39882.1| 549|Caenorhabditis elegans Hypothetical
protein H12I13.3 protein.
Length = 549
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = -3
Query: 559 FETTDY-LNHPLYDESIQQIV 500
F+ +DY NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,099
Number of Sequences: 27780
Number of extensions: 369550
Number of successful extensions: 876
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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