Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19c19f
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 86 2e-17
SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) 84 1e-16
SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4) 73 2e-13
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 67 2e-11
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 66 4e-11
SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-10
SB_29703| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-10
SB_58676| Best HMM Match : FUN14 (HMM E-Value=0.16) 60 1e-09
SB_32244| Best HMM Match : DUF1301 (HMM E-Value=5.1) 60 2e-09
SB_43990| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_29126| Best HMM Match : FUN14 (HMM E-Value=1.8) 51 1e-06
SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20577| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_7648| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_12292| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_8365| Best HMM Match : Bac_export_3 (HMM E-Value=8.8) 32 0.53
SB_14135| Best HMM Match : rve (HMM E-Value=0.0016) 31 1.2
SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_27150| Best HMM Match : VWA (HMM E-Value=1.1e-13) 29 4.9
SB_43258| Best HMM Match : BacA (HMM E-Value=1.8) 28 8.6
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 86.2 bits (204), Expect = 2e-17
Identities = 50/203 (24%), Positives = 90/203 (44%)
Frame = +2
Query: 5 YMTDVLKFNIKSTGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIYTTIAATG 184
Y+ DV+ +++ G ++A P++ I+ G V D +RGY + R+++ AT
Sbjct: 269 YLLDVIHYDVHHMGFVAATPFLLKAISCPVGGCVADMLRRRGYLRTISVRRLFYCAGATA 328
Query: 185 PGICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAA 364
G+ I+L+ Y V A + G Y G ++N LDI+P + + N I
Sbjct: 329 -GMFIVLSGYIA-HPVYVVIVVGLAGLMSGLIYPGFQVNMLDIAPRNSSIIMGLCNTIGG 386
Query: 365 ISGIVSPYLIGLLTPESTLKQWRVAFWXXXXXXXXXXXXXXMFAKGEQLWWDDVRKHGYP 544
+G ++P ++G +T T ++WR+ FW + ++ WD ++
Sbjct: 387 TTGFITPMMVGFMTRNKTAEEWRLVFWTTLLVYIIGATVFCLLVSVDRQQWDKPKEPNTQ 446
Query: 545 ANWKHGPLPSRTVDSEEQKEKTD 613
K G L + DS E E +
Sbjct: 447 TPVKRG-LEEVSNDSIELSEDAE 468
>SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41)
Length = 366
Score = 83.8 bits (198), Expect = 1e-16
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +2
Query: 44 GILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNA-RKIYTTIAATGPGICIILASYSG 220
G +SALPY+ M I G + D C++R A RK + T+ IC++ A Y+
Sbjct: 191 GFISALPYLVMSIFVQLGGHLAD-CLRRKQILTTTAVRKTFNTVGFVTQAICLVAAGYT- 248
Query: 221 CDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGL 400
D AV A+ + G +SG +N LDI+P +AG + N +A I GI SP L G
Sbjct: 249 TDWMTAVACLTVAVGVGGLAFSGFFVNHLDIAPQFAGILLGISNTVATIPGIFSPLLTGY 308
Query: 401 LTPESTLKQWRVAFWXXXXXXXXXXXXXXMFAKGE-QLWWDD 523
+ +WR+ F+ +FA GE Q W DD
Sbjct: 309 I----AAVEWRIVFYIGGAIYAAGAVFYAVFASGEKQTWADD 346
>SB_15046| Best HMM Match : IlvB_leader (HMM E-Value=4.4)
Length = 123
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/123 (32%), Positives = 62/123 (50%)
Frame = +2
Query: 41 TGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIYTTIAATGPGICIILASYSG 220
TG L+ALPYV G++ D+ IK S++N R+ T+ T I ++ Y+
Sbjct: 1 TGFLAALPYVLKAFVGPTGGVIVDWLIKNKL-SVKNTRRCVFTVGCTVASIFVLATGYAN 59
Query: 221 CDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGL 400
LAV + + G +G +N LDI+P YAG + N A G +SP ++G+
Sbjct: 60 -QPYLAVGLLTIGVGITGINAAGYAVNILDIAPKYAGVIMGVTNVFGAAPGFISPQIVGI 118
Query: 401 LTP 409
+TP
Sbjct: 119 ITP 121
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 66.9 bits (156), Expect = 2e-11
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Frame = +2
Query: 5 YMTDVLKFNIKSTGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIYTTIAATG 184
+ +VL F+IK G L+ALP++A I G V D K S RK T ++
Sbjct: 212 FFKEVLDFDIKKNGALTALPFIATLIVKNTSGYVSDRLQKHPSISRSVVRKGMTFLSFLF 271
Query: 185 PGICIILASYSGCDT-TLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIA 361
++ + C ++V + +G Y N +D+SP +AG T A+ N +
Sbjct: 272 AATLLVPVGFLNCSQQNISVLLLTLSCGSLGLYAPTGSANSVDLSPRFAGVTMAIYNCFS 331
Query: 362 AISGIVSPYLIGLLT 406
I+GI+ P +IGL+T
Sbjct: 332 NITGILVPTVIGLMT 346
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/117 (29%), Positives = 52/117 (44%)
Frame = +2
Query: 167 TIAATGPGICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAM 346
T A G G I++A Y+ + T AV + G +SG +N LDI+P YA +
Sbjct: 522 TDGALGAGSFIVIAGYA-TNATAAVSIMCVGVAASGLLHSGYNVNMLDIAPPYACIIMGL 580
Query: 347 VNGIAAISGIVSPYLIGLLTPESTLKQWRVAFWXXXXXXXXXXXXXXMFAKGEQLWW 517
N + +G +SP L+G++T ++WR FW F G+ W
Sbjct: 581 CNTLGTTAGFLSPLLVGIVTVNKEAREWRTVFWITFFVYLVGAIVFCTFMSGDLQPW 637
>SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 46.0 bits (104), Expect(2) = 4e-10
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +2
Query: 251 VFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLLTPESTL 421
VF +T G SG +N LDI+P YAG + N + GI +PY+ G +T + L
Sbjct: 125 VFCVT--GFNLSGFNVNHLDIAPRYAGILMGITNSFGTVPGIAAPYVAGWITNKKLL 179
Score = 36.3 bits (80), Expect(2) = 4e-10
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 38 STGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIY 163
+ G LSA+PY W+ G + D+ ++R S+ + RK++
Sbjct: 85 TNGFLSAVPYSTQWLFIVIAGQIADWLLRRRISSVSDVRKVF 126
>SB_29703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 45.2 bits (102), Expect(2) = 6e-10
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 251 VFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLLT 406
VF +T G SG +N LDI+P YAG + N + GI +PY+ G +T
Sbjct: 86 VFCVT--GFNLSGFNVNHLDIAPRYAGILMGITNSFGTVPGIAAPYVAGWIT 135
Score = 36.3 bits (80), Expect(2) = 6e-10
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 38 STGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIY 163
+ G LSA+PY W+ G + D+ ++R S+ + RK++
Sbjct: 46 TNGFLSAVPYSTQWLFIVIAGQIADWLLRRRISSVSDVRKVF 87
>SB_58676| Best HMM Match : FUN14 (HMM E-Value=0.16)
Length = 217
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 188 GICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAI 367
G+ I+ A Y+ V + A Y+G +N LDI+P AG + N +
Sbjct: 6 GVLIVAAGYA--HVVAVVVFVALAGASTSISYAGYTVNMLDIAPRCAGVIMGICNTVGTT 63
Query: 368 SGIVSPYLIGLLTPESTLKQWRVAFW 445
+G +SP L+G LT + +WR+ FW
Sbjct: 64 AGFISPMLVGFLTQHKSAAEWRIVFW 89
>SB_32244| Best HMM Match : DUF1301 (HMM E-Value=5.1)
Length = 149
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/142 (23%), Positives = 59/142 (41%)
Frame = +2
Query: 188 GICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAI 367
G+ I+L+ Y V A + G Y G ++N LDI+P + + N I
Sbjct: 5 GMFIVLSGYIA-HPVYVVIVVGLAGLMSGLIYPGFQVNMLDIAPRNSSIIMGLCNTIGGT 63
Query: 368 SGIVSPYLIGLLTPESTLKQWRVAFWXXXXXXXXXXXXXXMFAKGEQLWWDDVRKHGYPA 547
+G ++P ++G +T T ++WR+ FW + ++ WD ++
Sbjct: 64 TGFITPMMVGFMTRNKTAEEWRLVFWTTLLVYIIGATVFCLLVSVDRQQWDKPKEPNTQT 123
Query: 548 NWKHGPLPSRTVDSEEQKEKTD 613
K G L + DS E E +
Sbjct: 124 PVKRG-LEEVSNDSIELSEDAE 144
>SB_43990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/100 (30%), Positives = 48/100 (48%)
Frame = +2
Query: 104 VCDFCIKRGYHSIQNARKIYTTIAATGPGICIILASYSGCDTTLAVFWFVFAMTLMGAYY 283
+ DF + S+ N RK++T IC+I +Y T V V + + Y
Sbjct: 4 LADFMNTKEVMSMTNIRKLFTCGGCFLQCICLITVAY----TPYKVVPIVIGLGSIATMY 59
Query: 284 SGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLL 403
G +NP DI+P Y+G M N + +GI+ P ++GL+
Sbjct: 60 VGAGVNPFDIAPRYSGIIMGMANTLKTFNGIMGPLVVGLI 99
>SB_29126| Best HMM Match : FUN14 (HMM E-Value=1.8)
Length = 204
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +2
Query: 176 ATGPGICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNG 355
A G G I++A Y+ + T AV + G +SG +N LDI+P YA + N
Sbjct: 2 ALGAGSFIVIAGYA-TNATAAVSIMCVGVAASGLLHSGYNVNMLDIAPPYACIIMGLCNT 60
Query: 356 IAAISGIVSPYLIGLLT 406
+ +G +SP L+G++T
Sbjct: 61 LGTTAGFLSPLLVGIVT 77
>SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/122 (26%), Positives = 56/122 (45%)
Frame = +2
Query: 38 STGILSALPYVAMWIASFFFGLVCDFCIKRGYHSIQNARKIYTTIAATGPGICIILASYS 217
+TG+L + ++A+ I + DF + S+ N RK++T A P
Sbjct: 146 TTGVLYGVSFLAVAIMLPIMTRLADFMNTKEVMSMTNIRKLFTCGVACTP---------- 195
Query: 218 GCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIG 397
V V + M +G+ +N DI+P Y+G M N +A +GI++P ++G
Sbjct: 196 -----YKVVPIVLGLGSMAFLNAGVGVNAFDIAPRYSGIIMGMANTLATFNGIMAPPVVG 250
Query: 398 LL 403
L+
Sbjct: 251 LI 252
>SB_20577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 269 MGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLL 403
M +G+ +N DI+P Y+G M N +A +GI++P ++GL+
Sbjct: 29 MATLNAGVGVNAFDIAPRYSGIIMGMANTLATFNGIMAPLVVGLI 73
>SB_7648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 287 GMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLLT 406
G + P++ +P Y G A+ N I +GI +PY++G LT
Sbjct: 30 GHWVPPMEFAPRYCGLLFAIANSIGTRTGIAAPYVVGYLT 69
>SB_12292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 35.5 bits (78), Expect = 0.043
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 344 MVNGIAAISGIVSPYLIGLLTPESTLKQWRVAFW 445
+ N A+ G +SP + G++T ++WR+ FW
Sbjct: 3 LTNTFASTPGFISPQITGIVTKHKKQEEWRIVFW 36
>SB_8365| Best HMM Match : Bac_export_3 (HMM E-Value=8.8)
Length = 103
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/115 (23%), Positives = 45/115 (39%)
Frame = +2
Query: 167 TIAATGPGICIILASYSGCDTTLAVFWFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAM 346
T+ P + ++L++ A+ A+ L GA SG +N D+SP +AG
Sbjct: 1 TLGTCVPAL-VLLSTSQAVHFWQALVCMSMALCLCGASTSGSLMNIQDLSPGFAG----- 54
Query: 347 VNGIAAISGIVSPYLIGLLTPESTLKQWRVAFWXXXXXXXXXXXXXXMFAKGEQL 511
+ISG++ Y G + W F +FAKG ++
Sbjct: 55 -----SISGVLGVYATGYIL--HVTNSWTTVFQLTAVICTAGCAVYNVFAKGHKI 102
>SB_14135| Best HMM Match : rve (HMM E-Value=0.0016)
Length = 576
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 128 GYHSIQNARKIYTTIAATGPGICIIL 205
G+HS Q+ R+++ ++A T P +C +L
Sbjct: 503 GHHSSQSFRRVFPSLAGTAPILCAVL 528
>SB_43174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 245 WFVFAMTLMGAYYSGMKINPLDISPNYAGTTTAMVNGIAAISGIVSPYLIGLL 403
+ V + M G+ +N LDI+ + M N + +GI++P + GL+
Sbjct: 243 FIVVVLNSMSFINCGVGVNALDIATRLSCAIMGMANTFSTFNGIMAPIVAGLI 295
>SB_27150| Best HMM Match : VWA (HMM E-Value=1.1e-13)
Length = 600
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 328 WYHYGYGQRYCSNFRNRLTIFDWAFNSRIHTETMACGVLGV 450
W+H+G+ + S+++NR F + + I T+ V GV
Sbjct: 450 WFHHGFLDKLWSDWQNRGAKFKFQYYHTIKTKLPGANVRGV 490
>SB_43258| Best HMM Match : BacA (HMM E-Value=1.8)
Length = 215
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 5 YMTDVLKFNIKSTGILSALPYVAMWIASFFFGLVCD 112
Y+T V++ + + TG++ L +A I + F G++CD
Sbjct: 51 YLTKVVQLSNRHTGLVILLGQLADGIFTPFIGILCD 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,069,995
Number of Sequences: 59808
Number of extensions: 538003
Number of successful extensions: 1511
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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