Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19c19f
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    27   0.77 
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    27   0.77 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    26   1.0  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    26   1.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   5.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   5.4  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    24   5.4  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 81  SLRSSSVWFVTSVLKEVTTVFKMQEKFTLPSLRLVLEFVLFWPHILVVI 227
           ++ S+ ++FV  VLKE +T+    +    P  RLVL  ++ W  I + +
Sbjct: 220 AVSSAELYFVKDVLKEASTI---HDGIGTPDWRLVLCLLVPWTCICLTL 265


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +3

Query: 81  SLRSSSVWFVTSVLKEVTTVFKMQEKFTLPSLRLVLEFVLFWPHILVVI 227
           ++ S+ ++FV  VLKE +T+    +    P  RLVL  ++ W  I + +
Sbjct: 220 AVSSAELYFVKDVLKEASTI---HDGIGTPDWRLVLCLLVPWTCICLTL 265


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 190  SRTSRSDGSVNFSCILNTVVTSFNTEVTNQTEEER 86
            S   RSD     S + NTV   F+ +++ Q  +ER
Sbjct: 1007 SSAGRSDPMFRMSAVFNTVSDCFDFDISTQCFKER 1041


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 24  NLILNLLGFYQPCRM*RCGSLRSS-SVWFVTSVLKEVTTVFKMQEKFTLPSLRLVLEFVL 200
           N I +L G   P       +L SS  ++F   VLKE+  +    +   LP LRL L  VL
Sbjct: 206 NCIDSLAGSASPNDSSSNRTLTSSWELYFTKVVLKELDGI---DDGIGLPDLRLTLFLVL 262

Query: 201 FWPHILVVI 227
            W  + + +
Sbjct: 263 SWSLVFLTL 271


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 277 GTHESHCKHEPKHSQCGITTRI*GQN 200
           G HE + + E +HS   +T    G N
Sbjct: 658 GVHELNAQQEIRHSHINVTEHFKGNN 683


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 548 NWKHGPLPSRTVDSEEQKEKTDDK 619
           +W   P P   +D E + EKT+++
Sbjct: 86  DWPRAPNPREIIDLEARLEKTENE 109


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 472 CHH*YAETHPKRHTPLFQCGFWS*KPN 392
           CH  +  + P R T L    FW  +PN
Sbjct: 37  CHEDHLPSGPNRETYLKTWKFWKLEPN 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,254
Number of Sequences: 2352
Number of extensions: 17274
Number of successful extensions: 69
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)