Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19c15f
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 46 4e-06
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 42 7e-05
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 42 9e-05
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 40 3e-04
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 40 4e-04
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 39 9e-04
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 35 0.011
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 33 0.033
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 33 0.033
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 33 0.043
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 31 0.23
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.70
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.1
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 2.1
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 27 2.8
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 27 2.8
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 2.8
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 27 3.8
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 27 3.8
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 26 5.0
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 26 6.6
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 6.6
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 6.6
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 8.7
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 46.4 bits (105), Expect = 4e-06
Identities = 30/114 (26%), Positives = 51/114 (44%)
Frame = +1
Query: 373 LILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMGGATALFILR 552
+++ FY +VL P L +RFG +L +LS + GG A +R
Sbjct: 100 IMISIFYIPFVLCAFPFSYLYKRFGAARILPFFMLSFGAMSLCQAAVKNFGGMMA---VR 156
Query: 553 VLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSGLIMH 714
G+ E +PG++ L+ + + E AR AI + A + + G L+ + H
Sbjct: 157 WFLGMAESAVLPGVVYYLTTFYRRTELARRLAIFYAAANVSSAFGGLLAYGVFH 210
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 42.3 bits (95), Expect = 7e-05
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 388 FYYGYVLTHIPGGMLAERFG-GKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 564
FY G+V+ IPG ML +RF K+V STA+ T I + + L LR G
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVAA----STALWTIIIFLHCAAYNFSGLMALRFFLG 188
Query: 565 LGEGPTMPGLMAMLSKWAPKAERA 636
L E +P + A + + P +E+A
Sbjct: 189 LVESSLLPTMEATIGMFFPHSEQA 212
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 41.9 bits (94), Expect = 9e-05
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Frame = +1
Query: 277 DLNIVANATSPVLAY-YRADDAVLFEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGGK 453
DL I+ N SP+LAY Y ++ +G++ + G ++ + G L + FG K
Sbjct: 55 DLFII-NLVSPILAYLYWGGLTGHQDYPSGIRGVVNAATNIGNIMGQLLFGFLGDFFGRK 113
Query: 454 WVLGLGLLSTAICTF-ITPITVKMGGATA----LFILRVLEGLGEGPTMPGLMAMLSKWA 618
+V G ++ I T I + ++ TA LF RV+ G+G G P ++ S+ +
Sbjct: 114 FVYGKEMMVVIIATILIICLPDRIPTPTAKMMWLFAFRVMLGIGIGGDYPMSASITSEQS 173
Query: 619 PKAERARFGAIVFGGAQIGNIAGSYLSGLIM 711
R A +F G +AG + +I+
Sbjct: 174 LINRRGALLAWIFSNQGWGTLAGCVATLIIL 204
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 40.3 bits (90), Expect = 3e-04
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Frame = +1
Query: 277 DLNIVANATSPVLAY--YRADDAVLFEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGG 450
DL I+ N SP+ Y + + + GL+ + G V I G + + FG
Sbjct: 59 DLFII-NLVSPIYEYLYWGGLEGKKPHYPSGIHGLVNAAANIGNVFGQILFGFMGDFFGR 117
Query: 451 KWVLGLGLLSTAICTFIT-----PITVKMGGATALFILRVLEGLGEGPTMPGLMAMLSKW 615
K+V G ++ I T + I +G +F R L GLG G P + S+
Sbjct: 118 KFVYGKEMIVVIIATVLVIALPKSIPTPLGKMMWIFAWRWLLGLGIGGDYPMSATITSER 177
Query: 616 APKAERARFGAIVFGGAQIGNIAGSYLSGLIM 711
+ + R +IVF G +AG+ ++ +++
Sbjct: 178 SLLSRRGTLLSIVFSFQGFGTLAGAIVTIILL 209
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 39.9 bits (89), Expect = 4e-04
Identities = 26/105 (24%), Positives = 48/105 (45%)
Frame = +1
Query: 385 SFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 564
+FY GY++ P +L +RF L + L+ +T + G LRVL G
Sbjct: 108 AFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYPG----FIALRVLLG 163
Query: 565 LGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLS 699
+ E PG + + ++W ++E+ ++ +G I GS ++
Sbjct: 164 MMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGLGQILGSCMA 208
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 38.7 bits (86), Expect = 9e-04
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = +1
Query: 379 LGSFYYGYVLTHIPGGMLAERFGGK-WVLGLGLLSTAICTFITPITVKMGGATALFILRV 555
L FY GY++ +P ++ + WV + L + + K G A + LR
Sbjct: 133 LALFYVGYIIFEVPSNLMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRF 192
Query: 556 LEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLS 699
G+ E PGL +S+W + + AQI A S +S
Sbjct: 193 FLGVAESGLWPGLAYYMSRWYRGKHLGKRIGWYYTAAQIAAAAVSLVS 240
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 35.1 bits (77), Expect = 0.011
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 388 FYYGYVLTHIPGGMLAERFG-GKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 564
FY GY++ PG + + F GK+V GL S ++ F+ GG L LR G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFV-GLVTFSWSVIVFLHCCAYNYGG---LIALRFFLG 201
Query: 565 LGEGPTMPGLMAMLSKWAPKAERA 636
E +P + A + + E+A
Sbjct: 202 FTESCLLPAMEATMGMFFTHQEQA 225
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 33.5 bits (73), Expect = 0.033
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 367 QGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVK-----MGGA 531
+GL+ S G + + G + + FG K+V G ++ I T + K +
Sbjct: 95 RGLVNASANIGNIFGQLLFGFMGDFFGRKFVYGKEMVIVIIATVLVIAMPKSIHSPLSKM 154
Query: 532 TALFILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSGLIM 711
+F R L G+G G P A+ S+ + R +++F G +AG+ ++ +++
Sbjct: 155 MWVFCWRWLLGVGIGGDYPMSAAITSERSKIKRRGTLISLIFAFQGFGTLAGAIVTIILL 214
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 33.5 bits (73), Expect = 0.033
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1
Query: 487 ICTFITPITVKMGGATA----LFILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIV 654
IC F + + GA+ L + R ++GLG G + + ++S P R + I+
Sbjct: 166 ICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNIIISDITPLRTRPMYSGIL 225
Query: 655 FGGAQIGNIAGSYLSGLIMHEGSWENVFYM 744
+AG + G I +W +F++
Sbjct: 226 ATAWGAALVAGPIIGGAICQRTTWRWIFFI 255
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 33.1 bits (72), Expect = 0.043
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 367 QGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVK-----MGGA 531
+GL+ + G + + G + + FG K+V G ++ I T + K +
Sbjct: 95 RGLVNAASNIGNIFGQLMFGFMGDFFGRKFVYGKEMIIVIIATILLIAMPKSIHSPLSKM 154
Query: 532 TALFILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSGLIM 711
+F R L G+G G P A+ S+ + R +++F G +AG+ ++ +++
Sbjct: 155 MWVFCWRWLLGVGIGGDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTLAGAIVTIILL 214
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 30.7 bits (66), Expect = 0.23
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +1
Query: 373 LILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFI-----TPITVKMGGATA 537
+++ +FY L GG+ ++ G K+ L GL+ +I F + K+ G
Sbjct: 345 VLINTFYLPGALL---GGVFSDLLGPKYCLITGLVLQSIFGFFMSGFYNQLVHKIAGFCV 401
Query: 538 LF-ILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSG 702
++ I L G G + GL+A SK +P A R + I + G IAG Y G
Sbjct: 402 IYGIFLTLGEFGPGGNI-GLLA--SKTSPTAIRGVYYGIAAAIGKCGAIAGVYAFG 454
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.1 bits (62), Expect = 0.70
Identities = 23/96 (23%), Positives = 41/96 (42%)
Frame = +1
Query: 346 FEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMG 525
+ S A QGL+ G G + I +A+RFG + + +G + I I +T +
Sbjct: 55 YSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSI-IGFCAVYIIGIIVQVTA-VP 112
Query: 526 GATALFILRVLEGLGEGPTMPGLMAMLSKWAPKAER 633
+ + ++ G+G G S+ AP + R
Sbjct: 113 SWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIR 148
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/69 (18%), Positives = 31/69 (44%)
Frame = +1
Query: 538 LFILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSGLIMHE 717
L + R ++G+G G M + +++ P R + + + ++ G + G I
Sbjct: 181 LVLCRAVQGIGGGGIMSLVTIVIADITPLQTRPYYTGCMGVTWGVASVMGPLIGGAISQN 240
Query: 718 GSWENVFYM 744
+W +F++
Sbjct: 241 TTWRWIFFI 249
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 2.1
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Frame = -3
Query: 572 SPRPSNTRRMKRAVAPPILTVIGVINVQIAVDSKPNPRTHFPPNRSANIPPGICVS---- 405
S +P+ T M P V N AV PNP H S ++PP VS
Sbjct: 98 SSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVS--PNPAAHHAELPSGSVPPSASVSRANS 155
Query: 404 ---T*P**KEPRINPCVASLHSNSTASS 330
T P NP A++H S A+S
Sbjct: 156 TATTTPHKAGVVSNPAAANVHVLSVAAS 183
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/69 (18%), Positives = 31/69 (44%)
Frame = +1
Query: 538 LFILRVLEGLGEGPTMPGLMAMLSKWAPKAERARFGAIVFGGAQIGNIAGSYLSGLIMHE 717
L + R ++G+G G + +++ P R + + + ++ G + G I +
Sbjct: 181 LVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYTGCMGVTWGLASVMGPLIGGAISQK 240
Query: 718 GSWENVFYM 744
SW +F++
Sbjct: 241 ASWRWIFFI 249
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +1
Query: 346 FEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMG 525
+ +S A QGL++G G + + L +RFG + + +G I I +T +
Sbjct: 51 YSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCI-MGWTLVYITGVIVQLTT-IP 108
Query: 526 GATALFILRVLEGLGEG 576
+ + ++ GLG G
Sbjct: 109 SWVQMMVAKIWTGLGIG 125
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 223 KKNVAVEGDEHYDPNACPDLNIVANATSP 309
++ A+E D++Y+P+ P +ANA +P
Sbjct: 415 QRKAAIEEDDNYEPDENPLTETLANAHNP 443
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 578 GPSPRPSNTRRMKRAVAPPILTVIGVINVQIAVD 477
GP+ + SNT A+ PP T +G + I D
Sbjct: 125 GPTLKESNTTLRGEAILPPCKTPLGKVGSAICFD 158
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 73 FDKML--TGWKLALSKLFIIPQRYVLAVMGLLAIANAYTMRV 192
FDK + TG+++ S LF+I MGL I+ Y+ R+
Sbjct: 281 FDKHIDATGYEIEASSLFVIGNFLFFYEMGLFNISVIYSNRI 322
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 73 FDKML--TGWKLALSKLFIIPQRYVLAVMGLLAIANAYTMRV 192
FDK + TG+++ + LF+I + MGL I Y+ R+
Sbjct: 235 FDKHIDATGYEIEATSLFVIGNFFFFYEMGLFNIPVIYSNRI 276
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 262 PNACPDLNIVANATSP 309
PN CPD++++ N T P
Sbjct: 164 PNFCPDMSVLDNRTHP 179
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -2
Query: 615 PFR*HGHKTRHSWTFTETL*HSKNEKSSSATHFN 514
PF H H T HS TFT ++ S + +SSSATH N
Sbjct: 86 PFH-HPH-TIHSPTFTLSV--SPDSQSSSATHQN 115
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -3
Query: 575 PSPRPSNTRRMKRAVAPPILTVIGVIN 495
PSP+ N+++ + PP++T++G ++
Sbjct: 155 PSPKSLNSKKDSGPLRPPVVTLMGHVD 181
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 475 VNLI-PEPIFLRIVQLTFPQEYVLVRNHNKKNRESIPVSLRS 353
VN + P PI+ +V TFP+E + + + R PV + S
Sbjct: 217 VNAVAPGPIYTPLVSSTFPKEKIELSDQVPLGRMGQPVEVAS 258
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,229,160
Number of Sequences: 5004
Number of extensions: 69430
Number of successful extensions: 206
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -