Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19c10f
(665 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PYY1 Cluster: ENSANGP00000019231; n=2; Diptera|Rep: E... 185 7e-46
UniRef50_UPI0000DB786C Cluster: PREDICTED: similar to mitochondr... 175 1e-42
UniRef50_Q8MS27 Cluster: 39S ribosomal protein L35, mitochondria... 161 1e-38
UniRef50_UPI0000D57133 Cluster: PREDICTED: similar to CG13410-PA... 155 7e-37
UniRef50_Q0D286 Cluster: Zgc:153670; n=2; Danio rerio|Rep: Zgc:1... 135 1e-30
UniRef50_Q9NZE8 Cluster: 39S ribosomal protein L35, mitochondria... 135 1e-30
UniRef50_UPI000065E88E Cluster: 39S ribosomal protein L35, mitoc... 126 4e-28
UniRef50_UPI0000E48CA9 Cluster: PREDICTED: similar to mitochondr... 126 6e-28
UniRef50_Q9CQL6 Cluster: 39S ribosomal protein L35, mitochondria... 124 3e-27
UniRef50_UPI0000E804AE Cluster: PREDICTED: hypothetical protein;... 112 8e-24
UniRef50_UPI0000E25C5C Cluster: PREDICTED: hypothetical protein;... 110 3e-23
UniRef50_Q21454 Cluster: Probable 39S ribosomal protein L35, mit... 79 1e-13
UniRef50_A7S0L5 Cluster: Predicted protein; n=1; Nematostella ve... 61 2e-08
UniRef50_UPI0000E1F515 Cluster: PREDICTED: similar to mitochondr... 56 1e-06
UniRef50_A5K6E8 Cluster: 50S ribosomal protein L35; n=1; Plasmod... 37 0.50
UniRef50_Q2YZU7 Cluster: 50S ribosomal protein L35; n=4; Bacteri... 36 0.66
UniRef50_A5N257 Cluster: 50S ribosomal protein L35; n=5; Bacteri... 36 0.88
UniRef50_Q8I373 Cluster: 50S ribosomal protein L35; n=2; Plasmod... 36 0.88
UniRef50_Q7RNS8 Cluster: 50S ribosomal protein L35; n=2; Plasmod... 35 2.0
UniRef50_Q697G3 Cluster: ATP synthase A chain; n=2; Aleyrodinae|... 34 2.7
UniRef50_O74423 Cluster: Epsin-1; n=1; Schizosaccharomyces pombe... 34 3.5
UniRef50_A0CAD5 Cluster: Chromosome undetermined scaffold_161, w... 33 4.7
UniRef50_Q6FNR5 Cluster: Similar to tr|Q12424 Saccharomyces cere... 33 4.7
UniRef50_UPI0000563824 Cluster: hypothetical protein GLP_254_688... 33 6.2
UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=... 33 8.2
UniRef50_A5JZX1 Cluster: Glycerol-3-phosphate dehydrogenase, put... 33 8.2
>UniRef50_Q7PYY1 Cluster: ENSANGP00000019231; n=2; Diptera|Rep:
ENSANGP00000019231 - Anopheles gambiae str. PEST
Length = 192
Score = 185 bits (451), Expect = 7e-46
Identities = 78/106 (73%), Positives = 95/106 (89%)
Frame = +3
Query: 294 PTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVF 473
P+R+VIKFSL+KGKRKTVKAVIKRF RL WGGWIRT GRHKK+W+K + KRRLRQHV
Sbjct: 87 PSRTVIKFSLRKGKRKTVKAVIKRFKRLDWGGWIRTLSGRHKKMWRKKANRKRRLRQHVL 146
Query: 474 CNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRKQPIQ 611
N+TQ+TLLDKMVTKYWKRP++Y++DPY PYHTREEF +TR++P++
Sbjct: 147 VNATQSTLLDKMVTKYWKRPRYYIDDPYTPYHTREEFVYTRRKPLK 192
>UniRef50_UPI0000DB786C Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35 CG13410-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 CG13410-PA - Apis mellifera
Length = 185
Score = 175 bits (425), Expect = 1e-42
Identities = 74/105 (70%), Positives = 90/105 (85%)
Frame = +3
Query: 291 TPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHV 470
T R++IK+S KKGKRKTVKAV+KRF+RL+WG WIRT GRHKKLWKKS+ + +L+QHV
Sbjct: 78 TSVRTLIKYSRKKGKRKTVKAVLKRFYRLNWGIWIRTFAGRHKKLWKKSAKRRYKLKQHV 137
Query: 471 FCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRKQP 605
FCN+ Q+TLLDKMV YW+RP +YV+DPY PYH+REEF FTRKQP
Sbjct: 138 FCNAKQSTLLDKMVNYYWRRPHYYVDDPYTPYHSREEFPFTRKQP 182
>UniRef50_Q8MS27 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=1; Drosophila melanogaster|Rep: 39S
ribosomal protein L35, mitochondrial precursor -
Drosophila melanogaster (Fruit fly)
Length = 178
Score = 161 bits (391), Expect = 1e-38
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 6/132 (4%)
Frame = +3
Query: 225 LLPQNSLL--ANKQILDI--LMKIDFTP--TRSVIKFSLKKGKRKTVKAVIKRFFRLHWG 386
LLP SL A+ Q+L + ++ TP TR+V KFSL KGKRKTVKAV+KRF RL WG
Sbjct: 43 LLPTPSLASPAHHQLLQLPGVLAATGTPSNTRNVTKFSLVKGKRKTVKAVLKRFKRLDWG 102
Query: 387 GWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPY 566
WIRT GR KKL+KKS+A +RRL+QHVF N+TQ+ LLDKMVT YW+RPKH++ DPY PY
Sbjct: 103 AWIRTHSGRQKKLFKKSAALRRRLKQHVFTNATQSWLLDKMVTSYWRRPKHFINDPYKPY 162
Query: 567 HTREEFHFTRKQ 602
H+R E++ T+ +
Sbjct: 163 HSRNEYYATQSK 174
>UniRef50_UPI0000D57133 Cluster: PREDICTED: similar to CG13410-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13410-PA - Tribolium castaneum
Length = 172
Score = 155 bits (377), Expect = 7e-37
Identities = 77/173 (44%), Positives = 111/173 (64%)
Frame = +3
Query: 87 MLRFLSTAVRYARCLPASPLHNAITLTTKDVRHFSAFKNIEIQPRSLLPQNSLLANKQIL 266
ML+FL + +R + +PL + VR ++ I P+ SLL++ Q+
Sbjct: 1 MLKFL---IPVSRFVTRAPLVQNVVANVPLVRTITSV----IPTTIAAPKPSLLSSPQLF 53
Query: 267 DILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSAN 446
+ +R++IK L +G+ K+VKAV +RF+RLHWG WIRT GRHK+LWKKS AN
Sbjct: 54 QV-------SSRNLIKLGLNRGRCKSVKAVRRRFYRLHWGAWIRTMCGRHKRLWKKSGAN 106
Query: 447 KRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRKQP 605
KRRLRQHV CN++Q+ LLDKM +W + ++YV+DPY PYHTREE+ + ++P
Sbjct: 107 KRRLRQHVMCNASQSYLLDKMAGPFWTKRRYYVDDPYEPYHTREEYPLSARKP 159
>UniRef50_Q0D286 Cluster: Zgc:153670; n=2; Danio rerio|Rep:
Zgc:153670 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 175
Score = 135 bits (326), Expect = 1e-30
Identities = 59/106 (55%), Positives = 76/106 (71%)
Frame = +3
Query: 258 QILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKS 437
++ ++ + P R++ FSL+KGKRK+VK+V +RFFRLH G WIR K G KKLWKKS
Sbjct: 65 RVTPLMPSLLLQPVRNLTYFSLRKGKRKSVKSVTERFFRLHSGQWIRRKAGYKKKLWKKS 124
Query: 438 SANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
+A ++RLR+HVFCN TQ LLDKM + YWKR Y+ DPY YH R
Sbjct: 125 AARRKRLREHVFCNKTQCKLLDKMTSPYWKRRNWYLNDPYQKYHDR 170
>UniRef50_Q9NZE8 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=7; Euteleostomi|Rep: 39S ribosomal protein
L35, mitochondrial precursor - Homo sapiens (Human)
Length = 188
Score = 135 bits (326), Expect = 1e-30
Identities = 63/112 (56%), Positives = 78/112 (69%)
Frame = +3
Query: 240 SLLANKQILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHK 419
S++ N+ + +L + P RS+ FS +KGKRKTVKAVI RF RLH G W+R K G K
Sbjct: 73 SVILNR-MAPVLPSVLKLPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRKAGYKK 131
Query: 420 KLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
KLWKK+ A K+RLR+ VFCN TQ+ LLDKM T +WKR YV+DPY YH R
Sbjct: 132 KLWKKTPARKKRLREFVFCNKTQSKLLDKMTTSFWKRRNWYVDDPYQKYHDR 183
>UniRef50_UPI000065E88E Cluster: 39S ribosomal protein L35,
mitochondrial precursor (L35mt) (MRP-L35).; n=1;
Takifugu rubripes|Rep: 39S ribosomal protein L35,
mitochondrial precursor (L35mt) (MRP-L35). - Takifugu
rubripes
Length = 165
Score = 126 bits (305), Expect = 4e-28
Identities = 55/92 (59%), Positives = 67/92 (72%)
Frame = +3
Query: 300 RSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCN 479
R++ +S+KKGKRKTVKAV +RF RLH G WIR K G KKLWKK A ++RLR+HVFCN
Sbjct: 70 RNLTYYSVKKGKRKTVKAVTERFMRLHCGLWIRRKAGYKKKLWKKKPARRKRLREHVFCN 129
Query: 480 STQNTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
TQ+ L +KM T +WKR +V DPY YH R
Sbjct: 130 KTQSKLFNKMTTSFWKRRNWFVNDPYLKYHNR 161
>UniRef50_UPI0000E48CA9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 - Strongylocentrotus purpuratus
Length = 332
Score = 126 bits (303), Expect = 6e-28
Identities = 54/113 (47%), Positives = 81/113 (71%), Gaps = 4/113 (3%)
Frame = +3
Query: 249 ANKQILDILMK----IDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRH 416
+NK+I + +M + P R+V+++S+ KGK+KTV AVI RF+RL G W+R + GR
Sbjct: 206 SNKEITNQMMVTSPVLAHQPHRTVVRYSISKGKKKTVHAVIDRFYRLDCGLWVRPQSGRA 265
Query: 417 KKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
KKLWKK+ + RL+QHVFCN TQ+ +LD+M + +WK+ +HY++DP+ YH R
Sbjct: 266 KKLWKKTPRRRYRLKQHVFCNKTQSKMLDRMTSGFWKKRRHYLDDPFEQYHER 318
>UniRef50_Q9CQL6 Cluster: 39S ribosomal protein L35, mitochondrial
precursor; n=12; Amniota|Rep: 39S ribosomal protein L35,
mitochondrial precursor - Mus musculus (Mouse)
Length = 188
Score = 124 bits (298), Expect = 3e-27
Identities = 55/94 (58%), Positives = 67/94 (71%)
Frame = +3
Query: 294 PTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVF 473
P R++ S +KGKRKTVK+V+ RF RLH G W+R K G KKLWKKS+A K+RLR+ VF
Sbjct: 90 PVRALTYCSTRKGKRKTVKSVVHRFLRLHSGLWLRRKAGYKKKLWKKSTARKKRLREFVF 149
Query: 474 CNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
C+ TQ+ LLDKM T +WKR Y DPY YH R
Sbjct: 150 CSKTQSKLLDKMTTSFWKRRNWYAGDPYQMYHDR 183
>UniRef50_UPI0000E804AE Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 190
Score = 112 bits (269), Expect = 8e-24
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +3
Query: 258 QILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKS 437
++ +L I P R + + L+KGKRK+VKAV+KRF RLH G W+R K G KKLWKKS
Sbjct: 67 RLTPLLPSILEQPVRPLTYYGLRKGKRKSVKAVVKRFLRLHNGLWVRRKSGYKKKLWKKS 126
Query: 438 SANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPK-HYVEDPYAPYHTREEFHFT 593
+A K+RLR+ V CN TQ LLDKM T +WKR + E + H + + H+T
Sbjct: 127 TAQKKRLREFVLCNRTQCKLLDKMTTSFWKRRNCVFSEGFFLLTHWKIQLHYT 179
>UniRef50_UPI0000E25C5C Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 168
Score = 110 bits (265), Expect = 3e-23
Identities = 52/104 (50%), Positives = 70/104 (67%)
Frame = +3
Query: 219 RSLLPQNSLLANKQILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIR 398
R+L ++ + ++ +L + P R+VI S +KGKRKTVKAVI RFFRLH G W+R
Sbjct: 65 RNLTCGHTAVIPNRVAPLLPSVLKLPVRTVIYVSTQKGKRKTVKAVIYRFFRLHSGLWVR 124
Query: 399 TKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKR 530
K G KK WKK+ A K++LR+ VFC+ TQ+ LLDKM +WKR
Sbjct: 125 RKAGYKKKFWKKTPARKKQLREFVFCDKTQSKLLDKMTVSFWKR 168
>UniRef50_Q21454 Cluster: Probable 39S ribosomal protein L35,
mitochondrial precursor; n=2; Caenorhabditis|Rep:
Probable 39S ribosomal protein L35, mitochondrial
precursor - Caenorhabditis elegans
Length = 158
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = +3
Query: 309 IKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQ 488
I+F K G+++ + V+ RF RL+ G WI GRHK + K ++ + C Q
Sbjct: 35 IRFDQKVGRKRPAQDVLDRFKRLNNGMWIHAHPGRHKLRYMKDETWQKTSLYYETCTKEQ 94
Query: 489 NTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
+LDK++T YW RPKHY DPY+ Y+ R
Sbjct: 95 CEILDKLMTPYWLRPKHYPNDPYSAYNVR 123
>UniRef50_A7S0L5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 167
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = +3
Query: 297 TRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFC 476
TRSV S K+GKRKT KAV KR R G R K G+ + KK S N+R+LR+H +
Sbjct: 94 TRSVNLMS-KRGKRKTCKAVAKRVIRTGTGKLKRWKCGKTHNMIKKRSKNRRQLRKHTYV 152
Query: 477 NSTQNTLLDKMV 512
+ TQ LL+KM+
Sbjct: 153 SKTQLKLLNKML 164
>UniRef50_UPI0000E1F515 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L35 isoform a; n=1; Pan
troglodytes|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L35 isoform a - Pan troglodytes
Length = 180
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +3
Query: 261 ILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTK 404
+ +L + P RS+ FS +KGKRKTVKAVI RF RLH G W+R K
Sbjct: 105 VAPVLPSVLKLPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRK 152
>UniRef50_A5K6E8 Cluster: 50S ribosomal protein L35; n=1; Plasmodium
vivax|Rep: 50S ribosomal protein L35 - Plasmodium vivax
Length = 162
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 333 KRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQ 464
K KT K++ KRF G IR K GR+ L KK+S+NK LR+
Sbjct: 100 KPKTNKSIAKRFKITKNGKVIRKKAGRNHMLRKKTSSNKASLRK 143
>UniRef50_Q2YZU7 Cluster: 50S ribosomal protein L35; n=4;
Bacteria|Rep: 50S ribosomal protein L35 - uncultured
delta proteobacterium
Length = 80
Score = 36.3 bits (80), Expect = 0.66
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +3
Query: 333 KRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMV 512
K KT K KRF + G IR K L KSS KRRLR+ +ST + +M+
Sbjct: 18 KLKTKKGAAKRFRKTGSGKIIRNKAYTSHLLTNKSSTQKRRLRKSSVADSTNIKAIKRML 77
>UniRef50_A5N257 Cluster: 50S ribosomal protein L35; n=5;
Bacteria|Rep: 50S ribosomal protein L35 - Clostridium
kluyveri DSM 555
Length = 65
Score = 35.9 bits (79), Expect = 0.88
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 333 KRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMV 512
K KT K+V KRF G R + + L KKS KR LR+ + + TQ ++ K++
Sbjct: 3 KMKTKKSVAKRFKLTGTGKLKRAQAFKSHILTKKSRKTKRNLRKTAYVSETQEKVMKKLL 62
>UniRef50_Q8I373 Cluster: 50S ribosomal protein L35; n=2;
Plasmodium|Rep: 50S ribosomal protein L35 - Plasmodium
falciparum (isolate 3D7)
Length = 191
Score = 35.9 bits (79), Expect = 0.88
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 333 KRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQ 464
K KT K++ KRF G IR K GR+ L KK+S+NK LR+
Sbjct: 129 KPKTNKSIAKRFKLTKNGKLIRKKPGRNHFLRKKTSSNKASLRK 172
>UniRef50_Q7RNS8 Cluster: 50S ribosomal protein L35; n=2; Plasmodium
(Vinckeia)|Rep: 50S ribosomal protein L35 - Plasmodium
yoelii yoelii
Length = 168
Score = 34.7 bits (76), Expect = 2.0
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 198 KNIEIQPRSLLPQNSLLANKQILDILMKIDFT--PTRSVIKF--SLKKGKRKTVKAVIKR 365
K++ + +++L +N LL N L+ K + T + F K KT K++ KR
Sbjct: 58 KDMYVNSKNMLNKNKLLKNISFLNF-KKCTYKNWDTNFFVLFVRGCTNVKPKTNKSIAKR 116
Query: 366 FFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQ 464
F G IR K G L K++SAN+ LR+
Sbjct: 117 FKITKNGKLIRKKCGGSHMLRKRTSANRTSLRK 149
>UniRef50_Q697G3 Cluster: ATP synthase A chain; n=2;
Aleyrodinae|Rep: ATP synthase A chain - Neomaskellia
andropogonis
Length = 210
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -2
Query: 535 LGLFQYFVTILSSKVFCVELQNTCCLSLLLFADDFFHNFLCLPILVRIQPPQCSLKNRLI 356
LGLF Y ++ S +FC+ L ++L +F+NF+ L ++ P LI
Sbjct: 85 LGLFSYLFSVSSHFLFCLSFSFPLWLMMVLGGYMYFYNFMFLHLIPSGTPFMLMFFMVLI 144
Query: 355 TAFTVFLLP 329
++F+ P
Sbjct: 145 ETISLFMRP 153
>UniRef50_O74423 Cluster: Epsin-1; n=1; Schizosaccharomyces
pombe|Rep: Epsin-1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 706
Score = 33.9 bits (74), Expect = 3.5
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 480 STQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRKQPIQ 611
+T N + T Y+K+P ++ PY+ ++ +++ +QP+Q
Sbjct: 646 NTHNPFQSQQATGYYKQPMQQQQNMQQPYYNQQNYNYQNQQPMQ 689
>UniRef50_A0CAD5 Cluster: Chromosome undetermined scaffold_161,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_161,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1098
Score = 33.5 bits (73), Expect = 4.7
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 402 KIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPY-HTRE 578
+I + L++K + + R+ V NS Q TL ++ ++KR KH + P Y RE
Sbjct: 728 QIVKQDGLYEKIMNDNEKRREEVKKNSVQLTLKNERPFSFYKRDKHSSKKPRRKYWEERE 787
Query: 579 EFHFTRK 599
F F K
Sbjct: 788 RFVFKAK 794
>UniRef50_Q6FNR5 Cluster: Similar to tr|Q12424 Saccharomyces
cerevisiae YDL206w; n=1; Candida glabrata|Rep: Similar
to tr|Q12424 Saccharomyces cerevisiae YDL206w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 748
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 333 KRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANK 449
+RK ++ I+R+ R H+ GW+R + LW+ S K
Sbjct: 277 RRKYIRRGIQRYMRTHYTGWVRMTLNDCLDLWEHSDMLK 315
>UniRef50_UPI0000563824 Cluster: hypothetical protein
GLP_254_68837_66450; n=1; Giardia lamblia ATCC
50803|Rep: hypothetical protein GLP_254_68837_66450 -
Giardia lamblia ATCC 50803
Length = 795
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 33 VVSLILHKICLNYNIFVKMLRFLSTAVRYARCLPASPLHNAITLTTKDVRHF 188
VVSL+ + LN + + + V+ RC+ +SP+ + T T K ++HF
Sbjct: 345 VVSLVRRQAILNITVGNEGMMPGVVTVKLLRCISSSPIVGSFTYTGKPIKHF 396
>UniRef50_Q57S11 Cluster: Putative uncharacterized protein; n=1;
Salmonella choleraesuis|Rep: Putative uncharacterized
protein - Salmonella choleraesuis
Length = 528
Score = 32.7 bits (71), Expect = 8.2
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = -2
Query: 484 VELQNTCCLSLLLFADDFFHNFLCLPIL-VRIQPPQCSLKNRLITA-FTVFLLPFF--KL 317
V L CL ++++ + +FLC+ L V + + ++ +I A F +F+L F K
Sbjct: 146 VVLSIMICLPVIIYIQESKKSFLCISALAVILMTAEQPIRTLIIIAPFILFILIIFRSKT 205
Query: 316 NFITDL-VGVKSIFIKMSNICLLARSEF*GNKDLGCISIFLKAEKCLTSLVV 164
+ ++ L + V + KM+N LL R F D S+ + +K + +L +
Sbjct: 206 SVVSMLSIAVSFVIGKMANDYLLGR-HFPLKVDYSQASLLISPDKAIDNLFI 256
>UniRef50_O06962 Cluster: Hypothetical pyruvate formate-lyase; n=1;
Salmonella typhimurium|Rep: Hypothetical pyruvate
formate-lyase - Salmonella typhimurium
Length = 276
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 396 RTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKR 530
RT G KK WKKSS KR R + C K + + W R
Sbjct: 88 RTMRGILKKSWKKSSVYKRISRLNALCIRLAALTYQKFIPRLWPR 132
>UniRef50_A5JZX1 Cluster: Glycerol-3-phosphate dehydrogenase,
putative; n=5; Plasmodium|Rep: Glycerol-3-phosphate
dehydrogenase, putative - Plasmodium vivax
Length = 367
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = -2
Query: 370 KNRLITAFTVFLLPFFKLNFITDLVGVKSIFIKMSNICLLA 248
K+ L+ VF LP+FK+N + + VGV+ IF + NI LA
Sbjct: 185 KDTLLIWQRVFDLPYFKINCVNETVGVE-IFGALKNIITLA 224
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,026,408
Number of Sequences: 1657284
Number of extensions: 12386203
Number of successful extensions: 28779
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28772
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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