Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19c10f
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.9  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   9.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +3

Query: 522 WKRPKHY-VEDPYAPYHT 572
           WK   H  V DPY P+HT
Sbjct: 472 WKPSMHGGVCDPYTPWHT 489


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 243 LLANKQILDILMKIDFTPTRSVIKFS 320
           LLA   I+ +L   D TP R V  FS
Sbjct: 4   LLAVATIITLLQPYDATPARIVCYFS 29


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 462 QHVFCNSTQNTLLDKM 509
           QH F N   ++LLDKM
Sbjct: 611 QHEFKNGDSSSLLDKM 626


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 538 CLGLFQYFVTILSSKVFCVELQNTCC 461
           C+G    ++ +  SK++ +E    CC
Sbjct: 65  CIGRCASYIQVSGSKIWQMERSCMCC 90


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 587 LHKKTTYTEIMLFSYQ*IIIKFSLEL 664
           LH+K TY  +    Y    IK SL L
Sbjct: 50  LHRKPTYNNLQEMKYLERAIKESLRL 75


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 459 RQHVFCNSTQNTLLDKMV 512
           R+  +C +T+N   DKM+
Sbjct: 306 REFFYCAATKNPNFDKMI 323


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 587 LHKKTTYTEIMLFSYQ*IIIKFSLEL 664
           +H K TY+++    Y    IK SL L
Sbjct: 33  IHAKPTYSDLQNLKYLERCIKESLRL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,308
Number of Sequences: 336
Number of extensions: 3535
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)