Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19c10f
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-7|CAA86518.2|  158|Caenorhabditis elegans Hypothetical pr...    79   4e-15
Z47812-8|CAD59156.1|  414|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z47812-7|CAA87793.1|  397|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical ...    29   3.0  
AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical ...    29   3.9  
U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U80030-10|AAG24167.2|  378|Caenorhabditis elegans Serpentine rec...    28   5.2  
Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF016672-6|AAM34394.2|  165|Caenorhabditis elegans Vig (drosophi...    27   9.1  

>Z46381-7|CAA86518.2|  158|Caenorhabditis elegans Hypothetical
           protein M01F1.6 protein.
          Length = 158

 Score = 78.6 bits (185), Expect = 4e-15
 Identities = 35/89 (39%), Positives = 51/89 (57%)
 Frame = +3

Query: 309 IKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQ 488
           I+F  K G+++  + V+ RF RL+ G WI    GRHK  + K    ++    +  C   Q
Sbjct: 35  IRFDQKVGRKRPAQDVLDRFKRLNNGMWIHAHPGRHKLRYMKDETWQKTSLYYETCTKEQ 94

Query: 489 NTLLDKMVTKYWKRPKHYVEDPYAPYHTR 575
             +LDK++T YW RPKHY  DPY+ Y+ R
Sbjct: 95  CEILDKLMTPYWLRPKHYPNDPYSAYNVR 123


>Z47812-8|CAD59156.1|  414|Caenorhabditis elegans Hypothetical
           protein T05H10.6b protein.
          Length = 414

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 471 FCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRK 599
           +C+S +  L+ +M T  ++   H + DP   Y TREE    RK
Sbjct: 283 YCDSGKGPLMMEMAT--YRYHGHSMSDPGTSYRTREEIQEVRK 323


>Z47812-7|CAA87793.1|  397|Caenorhabditis elegans Hypothetical
           protein T05H10.6a protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 471 FCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRK 599
           +C+S +  L+ +M T  ++   H + DP   Y TREE    RK
Sbjct: 266 YCDSGKGPLMMEMAT--YRYHGHSMSDPGTSYRTREEIQEVRK 306


>AC024832-7|AAL27257.1|  389|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1b protein.
          Length = 389

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 80  CKNAAFFKYCCSLCSMSSGFALTQCNYAYY*RCQTFLS 193
           C  +A    CCS+C  +     T+  YA+     TFLS
Sbjct: 17  CFGSAACSLCCSICPTTKSSTTTRIMYAFLLFTSTFLS 54


>AC024832-6|AAL27256.1|  459|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.1a protein.
          Length = 459

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 80  CKNAAFFKYCCSLCSMSSGFALTQCNYAYY*RCQTFLS 193
           C  +A    CCS+C  +     T+  YA+     TFLS
Sbjct: 17  CFGSAACSLCCSICPTTKSSTTTRIMYAFLLFTSTFLS 54


>AF101305-7|AAF98591.1|  279|Caenorhabditis elegans Hypothetical
           protein C04F5.8 protein.
          Length = 279

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -2

Query: 487 CVELQNTCCLSLLLFADDFFHNFLCLPILVRIQPPQCSLKNRLITAFTVFLLPFFKLNFI 308
           C EL NTC +   L+ DD     +    L R   P CS ++ +   F    L   ++ F+
Sbjct: 42  CTEL-NTCEVDSFLYEDDDVEELVERDELSRTYCPVCSSRDTVPLNFISHSLSRLQVKFL 100

Query: 307 TDLV 296
            DL+
Sbjct: 101 FDLL 104


>U80445-1|AAB37794.1|  855|Caenorhabditis elegans Hypothetical
           protein C50F2.3 protein.
          Length = 855

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 593 CEVKFFTGVIWSIR-VFYIMLRSLPVFRHHFIK*SVLCRVTEHMLP 459
           CEV    G+I   R VF   LRSLPV +H  I    +  +T H LP
Sbjct: 124 CEVMIKRGLITETRRVFDRALRSLPVTQHMRIWTLYIGFLTSHDLP 169


>U80030-10|AAG24167.2|  378|Caenorhabditis elegans Serpentine
           receptor, class w protein136 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -2

Query: 550 SST*CLGLFQYFVTILSSKVFCVELQNTCCLSLLLFADDFFHNFLCLPILVRIQPPQCSL 371
           +S+ CLG F Y++T++    F ++  +  C S  LF    F   L +   + ++  Q S 
Sbjct: 97  ASSPCLGRFSYWITLIDKSGFVIKDFSRRC-STWLFLSIAFIRTLIVRNPMNLKYKQLSN 155

Query: 370 K-NRLITAFTVFLL 332
           +     T F VFLL
Sbjct: 156 QPTAFYTIFGVFLL 169


>Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical
           protein F30A10.4 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 474 CNSTQNTLLDKMVT-KYWKRPKHYVEDPYAPYHTREEFHFTRKQPIQK*CYLVISRS 641
           C+S QN +   M   +  KRP  +V + Y  Y  +E F      P    CY + S+S
Sbjct: 135 CDSIQNRIFRDMPPFEKLKRPIAFVRNIYGIYELQEVFLSISYHPDNYFCYAMDSKS 191


>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical
           protein C09G1.2 protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +3

Query: 165 TTKDVRHFSAFKNIEIQPRSLLPQNSLLANKQ 260
           T KD++ FS  KN+++QP S   ++S + N++
Sbjct: 492 TEKDLKSFSIKKNVQVQPCSPSLKSSDIGNER 523


>AF016672-6|AAM34394.2|  165|Caenorhabditis elegans Vig (drosophila
           vasa intronic gene)ortholog protein 1, isoform b
           protein.
          Length = 165

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 400 VRIQPPQCSLKNRLITAFTVFLLPFFKLNFITDLVGVKSIFIKMSNICLLARSEF 236
           V I P  CS    L   F  FL+P F L  ++  + + S+ +      LL  S F
Sbjct: 108 VPIYPTNCSFPKCLFLIFLFFLVPPFSLLLLSPALSI-SLLMSCPRFGLLVISRF 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,621
Number of Sequences: 27780
Number of extensions: 316269
Number of successful extensions: 780
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)