Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19b24f
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.28 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.6  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   4.6  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.6  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   6.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.0  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 626 WLFMLYILVLCNLL*FEYTLLFI 558
           W+F LY+L+LC+ +  E+  + +
Sbjct: 206 WIFQLYLLILCDQILREFDQIVV 228


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 508 DLVVSTSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNINN 624
           DL   +STP+   H+++ K+   +N +  +    ++I+N
Sbjct: 96  DLFRGSSTPESPEHYYNQKTLQANNNDASNGNLKFSIDN 134


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 361 VLEQSQTYSIASRISYFAVIL 423
           VLE+SQT  I  R++   +IL
Sbjct: 22  VLEESQTLEILKRLNRVVLIL 42


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 361 VLEQSQTYSIASRISYFAVIL 423
           VLE+SQT  I  R++   +IL
Sbjct: 82  VLEESQTLEILKRLNRVVLIL 102


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 361 VLEQSQTYSIASRISYFAVIL 423
           VLE+SQT  I  R++   +IL
Sbjct: 82  VLEESQTLEILKRLNRVVLIL 102


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
 Frame = +3

Query: 339 CQLGKCISIG-----TIPNIQHCIK 398
           C+L KC+S+G      +P +Q  +K
Sbjct: 243 CRLKKCLSVGMRPECVVPEVQCAVK 267


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 626 WLFMLYILVLCNLL*FEYTLLFIEKW*NSRSGV 528
           W  +   +V   +L F YT + IE W +S S +
Sbjct: 206 WYSISVFMVPLVVLIFTYTSICIEIWQSSESSL 238


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 294 ENTNPHHQNIVRRIYCQLGKC 356
           E   PH  N+V R  C+ G C
Sbjct: 125 EPFRPHPHNLVGREGCKKGVC 145


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 691 LGILNLYFHILLMQTNFKN 747
           LG+LN  F  L++   F+N
Sbjct: 501 LGVLNALFTFLIVVVQFEN 519


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,270
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)